Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MIR570-201ENST00000384917 97 ntBASIC4.17□□□□□ -1.74
VARSP26640 MIR1283-1-201ENST00000408494 87 ntBASIC4.17□□□□□ -1.74
VARSP26640 RNU6-628P-201ENST00000410675 107 ntBASIC4.17□□□□□ -1.74
VARSP26640 CALM2P4-201ENST00000430810 426 ntBASIC4.17□□□□□ -1.74
VARSP26640 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.17□□□□□ -1.74
VARSP26640 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.17□□□□□ -1.74
VARSP26640 AC008155.2-201ENST00000464337 397 ntBASIC4.17□□□□□ -1.74
VARSP26640 AC091167.1-201ENST00000492017 396 ntBASIC4.17□□□□□ -1.74
VARSP26640 RNU6-970P-201ENST00000516312 107 ntBASIC4.17□□□□□ -1.74
VARSP26640 RNU6-638P-201ENST00000516582 104 ntBASIC4.17□□□□□ -1.74
VARSP26640 AC113403.1-201ENST00000604910 193 ntBASIC4.17□□□□□ -1.74
VARSP26640 AC062037.1-201ENST00000605302 128 ntBASIC4.17□□□□□ -1.74
VARSP26640 MIR432-201ENST00000606207 94 ntBASIC4.17□□□□□ -1.74
VARSP26640 MIR92B-201ENST00000607575 96 ntBASIC4.17□□□□□ -1.74
VARSP26640 uc_338.13-201ENST00000618243 179 ntBASIC4.17□□□□□ -1.74
VARSP26640 MIR3653-201ENST00000625572 110 ntBASIC4.17□□□□□ -1.74
VARSP26640 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VARSP26640 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VARSP26640 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VARSP26640 AC058791.1-201ENST00000608412 3198 ntBASIC4.16□□□□□ -1.74
VARSP26640 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.16□□□□□ -1.74
VARSP26640 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VARSP26640 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.16□□□□□ -1.74
VARSP26640 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
VARSP26640 RNA5SP175-201ENST00000364275 119 ntBASIC4.16□□□□□ -1.74
VARSP26640 RNU1-89P-201ENST00000384592 164 ntBASIC4.16□□□□□ -1.74
VARSP26640 RNU6-440P-201ENST00000390882 105 ntBASIC4.16□□□□□ -1.74
VARSP26640 RNU6-1275P-201ENST00000391087 107 ntBASIC4.16□□□□□ -1.74
VARSP26640 AC245291.1-201ENST00000419501 328 ntBASIC4.16□□□□□ -1.74
VARSP26640 SNORD11-201ENST00000459124 84 ntBASIC4.16□□□□□ -1.74
VARSP26640 RPL27AP5-201ENST00000469428 449 ntBASIC4.16□□□□□ -1.74
VARSP26640 RNU7-149P-201ENST00000516739 59 ntBASIC4.16□□□□□ -1.74
VARSP26640 AC106785.1-201ENST00000565935 262 ntBASIC4.16□□□□□ -1.74
VARSP26640 MIR4753-201ENST00000585119 83 ntBASIC4.16□□□□□ -1.74
VARSP26640 AC002076.2-201ENST00000617362 122 ntBASIC4.16□□□□□ -1.74
VARSP26640 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.16□□□□□ -1.74
VARSP26640 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VARSP26640 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.16□□□□□ -1.74
VARSP26640 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.15□□□□□ -1.74
VARSP26640 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.15□□□□□ -1.74
VARSP26640 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
VARSP26640 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
VARSP26640 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.15□□□□□ -1.75
VARSP26640 MIR423-201ENST00000362201 94 ntBASIC4.15□□□□□ -1.75
VARSP26640 Y_RNA.111-201ENST00000363248 100 ntBASIC4.15□□□□□ -1.75
VARSP26640 RNU6-1014P-201ENST00000383940 103 ntBASIC4.15□□□□□ -1.75
VARSP26640 SNORA11F-201ENST00000408237 128 ntBASIC4.15□□□□□ -1.75
VARSP26640 RNA5SP136-201ENST00000410906 107 ntBASIC4.15□□□□□ -1.75
VARSP26640 RNU6-57P-201ENST00000411348 103 ntBASIC4.15□□□□□ -1.75
VARSP26640 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.15□□□□□ -1.75
VARSP26640 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.15□□□□□ -1.75
VARSP26640 RNU7-14P-201ENST00000459331 62 ntBASIC4.15□□□□□ -1.75
VARSP26640 RNU6-221P-201ENST00000459541 99 ntBASIC4.15□□□□□ -1.75
VARSP26640 RPL39P34-201ENST00000477141 156 ntBASIC4.15□□□□□ -1.75
VARSP26640 RN7SL604P-201ENST00000492589 296 ntBASIC4.15□□□□□ -1.75
VARSP26640 RNA5SP281-201ENST00000516504 135 ntBASIC4.15□□□□□ -1.75
VARSP26640 AC025647.1-201ENST00000517879 253 ntBASIC4.15□□□□□ -1.75
VARSP26640 AC107934.2-201ENST00000518653 310 ntBASIC4.15□□□□□ -1.75
VARSP26640 AC007751.1-201ENST00000529260 376 ntBASIC4.15□□□□□ -1.75
VARSP26640 CYCSP29-201ENST00000533731 318 ntBASIC4.15□□□□□ -1.75
VARSP26640 AL365205.2-201ENST00000594586 68 ntBASIC4.15□□□□□ -1.75
VARSP26640 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VARSP26640 MIR1245B-201ENST00000636115 69 ntBASIC4.15□□□□□ -1.75
VARSP26640 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VARSP26640 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.15□□□□□ -1.75
VARSP26640 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.14□□□□□ -1.75
VARSP26640 AC000403.1-201ENST00000613696 3585 ntBASIC4.14□□□□□ -1.75
VARSP26640 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
VARSP26640 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.14□□□□□ -1.75
VARSP26640 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
VARSP26640 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VARSP26640 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VARSP26640 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VARSP26640 SNORD32B-201ENST00000364460 84 ntBASIC4.14□□□□□ -1.75
VARSP26640 MIR488-201ENST00000365739 83 ntBASIC4.14□□□□□ -1.75
VARSP26640 RNU6-1113P-201ENST00000384348 107 ntBASIC4.14□□□□□ -1.75
VARSP26640 Y_RNA.486-201ENST00000384398 107 ntBASIC4.14□□□□□ -1.75
VARSP26640 MIR300-201ENST00000401138 83 ntBASIC4.14□□□□□ -1.75
VARSP26640 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.14□□□□□ -1.75
VARSP26640 AC025554.1-201ENST00000505641 188 ntBASIC4.14□□□□□ -1.75
VARSP26640 RN7SKP43-201ENST00000516173 320 ntBASIC4.14□□□□□ -1.75
VARSP26640 SNORA70.14-201ENST00000516205 110 ntBASIC4.14□□□□□ -1.75
VARSP26640 RNU6-365P-201ENST00000517113 106 ntBASIC4.14□□□□□ -1.75
VARSP26640 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
VARSP26640 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.14□□□□□ -1.75
VARSP26640 AC140479.6-201ENST00000633535 357 ntBASIC4.14□□□□□ -1.75
VARSP26640 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VARSP26640 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VARSP26640 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VARSP26640 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.13□□□□□ -1.75
VARSP26640 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VARSP26640 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.13□□□□□ -1.75
VARSP26640 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.13□□□□□ -1.75
VARSP26640 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
VARSP26640 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VARSP26640 SNORA63.5-201ENST00000363548 123 ntBASIC4.13□□□□□ -1.75
VARSP26640 RNU6-1209P-201ENST00000363655 107 ntBASIC4.13□□□□□ -1.75
VARSP26640 Y_RNA.796-201ENST00000364268 102 ntBASIC4.13□□□□□ -1.75
VARSP26640 Y_RNA.799-201ENST00000364992 102 ntBASIC4.13□□□□□ -1.75
VARSP26640 AL359837.1-201ENST00000381357 287 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms