Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.03□□□□□ -1.92
XPAP23025 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.03□□□□□ -1.92
XPAP23025 AC011373.1-201ENST00000607270 237 ntBASIC3.03□□□□□ -1.92
XPAP23025 AC005562.2-201ENST00000618264 111 ntBASIC3.03□□□□□ -1.92
XPAP23025 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
XPAP23025 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
XPAP23025 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
XPAP23025 SNORD87-201ENST00000364849 89 ntBASIC3.02□□□□□ -1.93
XPAP23025 RNU6-290P-201ENST00000365212 101 ntBASIC3.02□□□□□ -1.93
XPAP23025 Y_RNA.416-201ENST00000384014 113 ntBASIC3.02□□□□□ -1.93
XPAP23025 AL603910.2-201ENST00000407268 136 ntBASIC3.02□□□□□ -1.93
XPAP23025 RNA5SP504-201ENST00000410676 117 ntBASIC3.02□□□□□ -1.93
XPAP23025 RNU5A-5P-201ENST00000411054 116 ntBASIC3.02□□□□□ -1.93
XPAP23025 RNU6-847P-201ENST00000411115 108 ntBASIC3.02□□□□□ -1.93
XPAP23025 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.02□□□□□ -1.93
XPAP23025 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.02□□□□□ -1.93
XPAP23025 RAB28P5-201ENST00000427490 651 ntBASIC3.02□□□□□ -1.93
XPAP23025 RPL30P4-201ENST00000429309 333 ntBASIC3.02□□□□□ -1.93
XPAP23025 RNU2-44P-201ENST00000516795 194 ntBASIC3.02□□□□□ -1.93
XPAP23025 MIR5006-201ENST00000583027 110 ntBASIC3.02□□□□□ -1.93
XPAP23025 AC005176.2-201ENST00000596933 147 ntBASIC3.02□□□□□ -1.93
XPAP23025 SNORD113-5-201ENST00000607261 78 ntBASIC3.02□□□□□ -1.93
XPAP23025 AC127459.3-201ENST00000624328 466 ntBASIC3.02□□□□□ -1.93
XPAP23025 AC090517.3-201ENST00000625170 141 ntBASIC3.02□□□□□ -1.93
XPAP23025 MIR7157-201ENST00000635801 60 ntBASIC3.02□□□□□ -1.93
XPAP23025 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.02□□□□□ -1.93
XPAP23025 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
XPAP23025 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.01□□□□□ -1.93
XPAP23025 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.01□□□□□ -1.93
XPAP23025 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.01□□□□□ -1.93
XPAP23025 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
XPAP23025 RNU1-62P-201ENST00000362599 164 ntBASIC3.01□□□□□ -1.93
XPAP23025 RNU4-90P-201ENST00000362773 141 ntBASIC3.01□□□□□ -1.93
XPAP23025 Y_RNA.101-201ENST00000363154 102 ntBASIC3.01□□□□□ -1.93
XPAP23025 SNORA54-201ENST00000384281 123 ntBASIC3.01□□□□□ -1.93
XPAP23025 Y_RNA.498-201ENST00000384460 102 ntBASIC3.01□□□□□ -1.93
XPAP23025 MIR218-1-201ENST00000384999 110 ntBASIC3.01□□□□□ -1.93
XPAP23025 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
XPAP23025 NDUFB4P4-201ENST00000404822 243 ntBASIC3.01□□□□□ -1.93
XPAP23025 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.01□□□□□ -1.93
XPAP23025 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
XPAP23025 AL445687.1-201ENST00000439946 251 ntBASIC3.01□□□□□ -1.93
XPAP23025 RPS12P18-201ENST00000442381 270 ntBASIC3.01□□□□□ -1.93
XPAP23025 RN7SL20P-201ENST00000488827 297 ntBASIC3.01□□□□□ -1.93
XPAP23025 SEPT14P8-201ENST00000508026 178 ntBASIC3.01□□□□□ -1.93
XPAP23025 MIR449C-201ENST00000516047 92 ntBASIC3.01□□□□□ -1.93
XPAP23025 AC109329.2-201ENST00000519658 482 ntBASIC3.01□□□□□ -1.93
XPAP23025 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.01□□□□□ -1.93
XPAP23025 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.01□□□□□ -1.93
XPAP23025 MIR3117-201ENST00000584034 78 ntBASIC3.01□□□□□ -1.93
XPAP23025 AC023043.3-201ENST00000593113 385 ntBASIC3.01□□□□□ -1.93
XPAP23025 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.01□□□□□ -1.93
XPAP23025 AC093732.2-201ENST00000607950 274 ntBASIC3.01□□□□□ -1.93
XPAP23025 TCL6_2.1-201ENST00000615162 119 ntBASIC3.01□□□□□ -1.93
XPAP23025 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.01□□□□□ -1.93
XPAP23025 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.01□□□□□ -1.93
XPAP23025 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.01□□□□□ -1.93
XPAP23025 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
XPAP23025 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.01□□□□□ -1.93
XPAP23025 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
XPAP23025 Y_RNA.20-201ENST00000362479 113 ntBASIC3□□□□□ -1.93
XPAP23025 Y_RNA.54-201ENST00000362766 105 ntBASIC3□□□□□ -1.93
XPAP23025 RNU6-486P-201ENST00000363116 107 ntBASIC3□□□□□ -1.93
XPAP23025 RNU5F-3P-201ENST00000363767 117 ntBASIC3□□□□□ -1.93
XPAP23025 RNU6-944P-201ENST00000364023 107 ntBASIC3□□□□□ -1.93
XPAP23025 SNORD32B-201ENST00000364460 84 ntBASIC3□□□□□ -1.93
XPAP23025 Y_RNA.277-201ENST00000364754 102 ntBASIC3□□□□□ -1.93
XPAP23025 Y_RNA.446-201ENST00000384178 104 ntBASIC3□□□□□ -1.93
XPAP23025 RNU6-21P-201ENST00000384710 107 ntBASIC3□□□□□ -1.93
XPAP23025 Y_RNA.597-201ENST00000410463 100 ntBASIC3□□□□□ -1.93
XPAP23025 RPL19P1-201ENST00000411635 428 ntBASIC3□□□□□ -1.93
XPAP23025 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3□□□□□ -1.93
XPAP23025 COTL1P1-201ENST00000422309 375 ntBASIC3□□□□□ -1.93
XPAP23025 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3□□□□□ -1.93
XPAP23025 RPS23P5-201ENST00000495419 428 ntBASIC3□□□□□ -1.93
XPAP23025 AC083906.5-201ENST00000503722 328 ntBASIC3□□□□□ -1.93
XPAP23025 KRTAP13-6P-201ENST00000508999 371 ntBASIC3□□□□□ -1.93
XPAP23025 SERF1AP1-201ENST00000514575 187 ntBASIC3□□□□□ -1.93
XPAP23025 AC074133.1-201ENST00000515696 183 ntBASIC3□□□□□ -1.93
XPAP23025 AC026470.2-201ENST00000561492 181 ntBASIC3□□□□□ -1.93
XPAP23025 MIR4643-201ENST00000577473 78 ntBASIC3□□□□□ -1.93
XPAP23025 AL356280.1-201ENST00000603614 379 ntBASIC3□□□□□ -1.93
XPAP23025 AL670379.2-201ENST00000604983 252 ntBASIC3□□□□□ -1.93
XPAP23025 AC091932.3-201ENST00000624223 323 ntBASIC3□□□□□ -1.93
XPAP23025 AL137790.1-201ENST00000634283 177 ntBASIC3□□□□□ -1.93
XPAP23025 IGHVIII-44-202ENST00000636235 289 ntBASIC3□□□□□ -1.93
XPAP23025 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
XPAP23025 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3□□□□□ -1.93
XPAP23025 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
XPAP23025 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
XPAP23025 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
XPAP23025 Y_RNA.230-201ENST00000364348 109 ntBASIC2.99□□□□□ -1.93
XPAP23025 RNU6-338P-201ENST00000383888 105 ntBASIC2.99□□□□□ -1.93
XPAP23025 RNU6-1274P-201ENST00000384557 107 ntBASIC2.99□□□□□ -1.93
XPAP23025 Y_RNA.552-201ENST00000384665 112 ntBASIC2.99□□□□□ -1.93
XPAP23025 MIR320B2-201ENST00000408479 138 ntBASIC2.99□□□□□ -1.93
XPAP23025 RN7SKP123-201ENST00000410732 291 ntBASIC2.99□□□□□ -1.93
XPAP23025 EEF1A1P41-201ENST00000414667 207 ntBASIC2.99□□□□□ -1.93
XPAP23025 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.99□□□□□ -1.93
XPAP23025 AL139109.1-201ENST00000455491 297 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms