Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.05□□□□□ -1.76
RFX1P22670 Y_RNA.238-201ENST00000364441 102 ntBASIC4.05□□□□□ -1.76
RFX1P22670 Y_RNA.287-201ENST00000364853 94 ntBASIC4.05□□□□□ -1.76
RFX1P22670 U8.11-201ENST00000384699 133 ntBASIC4.05□□□□□ -1.76
RFX1P22670 SNORA19-201ENST00000384737 128 ntBASIC4.05□□□□□ -1.76
RFX1P22670 MIR183-201ENST00000384958 110 ntBASIC4.05□□□□□ -1.76
RFX1P22670 MIR95-201ENST00000385072 81 ntBASIC4.05□□□□□ -1.76
RFX1P22670 U8.18-201ENST00000459285 133 ntBASIC4.05□□□□□ -1.76
RFX1P22670 RNU7-57P-201ENST00000459540 60 ntBASIC4.05□□□□□ -1.76
RFX1P22670 RN7SL293P-201ENST00000481765 281 ntBASIC4.05□□□□□ -1.76
RFX1P22670 RNU7-200P-201ENST00000516105 62 ntBASIC4.05□□□□□ -1.76
RFX1P22670 AC100767.1-201ENST00000528178 123 ntBASIC4.05□□□□□ -1.76
RFX1P22670 MIR4298-201ENST00000584380 73 ntBASIC4.05□□□□□ -1.76
RFX1P22670 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.05□□□□□ -1.76
RFX1P22670 MIR8058-201ENST00000615737 89 ntBASIC4.05□□□□□ -1.76
RFX1P22670 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFX1P22670 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
RFX1P22670 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RFX1P22670 MAPK10-362ENST00000641864 4484 ntBASIC4.04□□□□□ -1.76
RFX1P22670 Y_RNA.121-201ENST00000363309 113 ntBASIC4.04□□□□□ -1.76
RFX1P22670 Y_RNA.310-201ENST00000365063 113 ntBASIC4.04□□□□□ -1.76
RFX1P22670 Y_RNA.341-201ENST00000365341 102 ntBASIC4.04□□□□□ -1.76
RFX1P22670 RNU4-17P-201ENST00000365598 141 ntBASIC4.04□□□□□ -1.76
RFX1P22670 SNORA72.4-201ENST00000384174 132 ntBASIC4.04□□□□□ -1.76
RFX1P22670 RNVU1-14-201ENST00000384770 164 ntBASIC4.04□□□□□ -1.76
RFX1P22670 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RFX1P22670 AL139095.1-201ENST00000404326 391 ntBASIC4.04□□□□□ -1.76
RFX1P22670 AC009969.1-201ENST00000438726 172 ntBASIC4.04□□□□□ -1.76
RFX1P22670 RNU6-221P-201ENST00000459541 99 ntBASIC4.04□□□□□ -1.76
RFX1P22670 MTND5P41-201ENST00000517498 206 ntBASIC4.04□□□□□ -1.76
RFX1P22670 snoZ196.1-201ENST00000625269 89 ntBASIC4.04□□□□□ -1.76
RFX1P22670 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFX1P22670 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
RFX1P22670 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.04□□□□□ -1.76
RFX1P22670 MAPK10-266ENST00000641066 6555 ntBASIC4.04□□□□□ -1.76
RFX1P22670 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RFX1P22670 Y_RNA.8-201ENST00000362353 102 ntBASIC4.03□□□□□ -1.76
RFX1P22670 AL355497.1-201ENST00000406262 551 ntBASIC4.03□□□□□ -1.76
RFX1P22670 RNU6-855P-201ENST00000410395 104 ntBASIC4.03□□□□□ -1.76
RFX1P22670 RNU2-2P-201ENST00000410396 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.03□□□□□ -1.76
RFX1P22670 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.03□□□□□ -1.76
RFX1P22670 AC016925.1-201ENST00000458303 298 ntBASIC4.03□□□□□ -1.76
RFX1P22670 RPL27AP5-201ENST00000469428 449 ntBASIC4.03□□□□□ -1.76
RFX1P22670 RPS29P2-201ENST00000479278 136 ntBASIC4.03□□□□□ -1.76
RFX1P22670 MIR2114-201ENST00000516645 80 ntBASIC4.03□□□□□ -1.76
RFX1P22670 MIR5688-201ENST00000580619 83 ntBASIC4.03□□□□□ -1.76
RFX1P22670 RNU2-4P-201ENST00000606190 192 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.15-201ENST00000611544 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.16-201ENST00000613119 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.12-201ENST00000613778 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.9-201ENST00000615427 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.11-201ENST00000616345 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.2-201ENST00000616535 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.03□□□□□ -1.76
RFX1P22670 U2.3-201ENST00000617785 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.19-201ENST00000618602 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 RNU2-1-201ENST00000618664 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.6-201ENST00000619225 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.5-201ENST00000619465 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 U2.10-201ENST00000620268 191 ntBASIC4.03□□□□□ -1.76
RFX1P22670 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.03□□□□□ -1.76
RFX1P22670 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.03□□□□□ -1.76
RFX1P22670 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFX1P22670 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RFX1P22670 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFX1P22670 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFX1P22670 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
RFX1P22670 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFX1P22670 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFX1P22670 RNU6-899P-201ENST00000363947 107 ntBASIC4.02□□□□□ -1.77
RFX1P22670 RNU6-312P-201ENST00000364629 107 ntBASIC4.02□□□□□ -1.77
RFX1P22670 MTCO2P33-201ENST00000402100 465 ntBASIC4.02□□□□□ -1.77
RFX1P22670 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.02□□□□□ -1.77
RFX1P22670 HSPE1P13-201ENST00000451143 297 ntBASIC4.02□□□□□ -1.77
RFX1P22670 CYP2C59P-201ENST00000457790 269 ntBASIC4.02□□□□□ -1.77
RFX1P22670 RPS29P12-201ENST00000460178 152 ntBASIC4.02□□□□□ -1.77
RFX1P22670 ATP5EP1-201ENST00000510257 156 ntBASIC4.02□□□□□ -1.77
RFX1P22670 SCARNA14-201ENST00000516903 136 ntBASIC4.02□□□□□ -1.77
RFX1P22670 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.02□□□□□ -1.77
RFX1P22670 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.02□□□□□ -1.77
RFX1P22670 AC005000.2-201ENST00000605468 310 ntBASIC4.02□□□□□ -1.77
RFX1P22670 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.02□□□□□ -1.77
RFX1P22670 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RFX1P22670 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFX1P22670 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFX1P22670 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFX1P22670 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFX1P22670 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.01□□□□□ -1.77
RFX1P22670 AC068700.1-201ENST00000565862 3754 ntBASIC4.01□□□□□ -1.77
RFX1P22670 AC134026.1-201ENST00000623249 2239 ntBASIC4.01□□□□□ -1.77
RFX1P22670 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFX1P22670 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFX1P22670 RNA5SP50-201ENST00000363731 107 ntBASIC4.01□□□□□ -1.77
RFX1P22670 RNU6-1048P-201ENST00000364054 107 ntBASIC4.01□□□□□ -1.77
RFX1P22670 Y_RNA.398-201ENST00000383952 99 ntBASIC4.01□□□□□ -1.77
RFX1P22670 MIR873-201ENST00000401120 77 ntBASIC4.01□□□□□ -1.77
RFX1P22670 U3.39-201ENST00000408569 239 ntBASIC4.01□□□□□ -1.77
RFX1P22670 RNU5E-9P-201ENST00000411164 104 ntBASIC4.01□□□□□ -1.77
RFX1P22670 AC006989.1-201ENST00000427212 131 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms