Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC010531.2-201ENST00000465012 153 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 AC087477.1-201ENST00000465747 340 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 RPL23AP75-201ENST00000491601 451 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 AF186996.7-201ENST00000492781 209 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.51□□□□□ -2.17
XRCC1P18887 AC091435.1-201ENST00000505442 584 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 RNU6-1198P-201ENST00000516904 67 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 DEFB131C-201ENST00000528817 165 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.51□□□□□ -2.17
XRCC1P18887 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.51□□□□□ -2.17
XRCC1P18887 MIR5006-201ENST00000583027 110 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 POLR3GP2-201ENST00000588366 668 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 MIR3976-201ENST00000606807 139 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.51□□□□□ -2.17
XRCC1P18887 AC083806.3-201ENST00000614016 455 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 AC022513.1-201ENST00000624512 117 ntBASIC1.51□□□□□ -2.17
XRCC1P18887 BX322639.1-202ENST00000423987 2213 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 MIR378A-201ENST00000362177 66 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 Y_RNA.3-201ENST00000362331 103 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 RNU6-545P-201ENST00000362681 104 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 BTF3P4-201ENST00000418852 495 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.5□□□□□ -2.17
XRCC1P18887 MTND1P34-201ENST00000438556 671 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.5□□□□□ -2.17
XRCC1P18887 AC074290.1-201ENST00000448883 135 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 MTND1P11-201ENST00000456661 876 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 MTCO2P30-201ENST00000503662 364 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 RNU6-948P-201ENST00000516374 107 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 RNA5SP54-201ENST00000516951 92 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 RNU6-856P-201ENST00000516959 98 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 AC023043.2-201ENST00000589678 1026 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
XRCC1P18887 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.5□□□□□ -2.17
XRCC1P18887 AC009033.1-201ENST00000624279 431 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 SCARNA4-201ENST00000629045 128 ntBASIC1.5□□□□□ -2.17
XRCC1P18887 AC245060.5-201ENST00000610778 3293 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
XRCC1P18887 Y_RNA.89-201ENST00000363031 102 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 RNU6-1252P-201ENST00000363054 104 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 Y_RNA.151-201ENST00000363566 112 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 Y_RNA.157-201ENST00000363638 102 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 RNU4-9P-201ENST00000364951 139 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
XRCC1P18887 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 AP1B1P2-201ENST00000416196 106 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 AL513185.2-201ENST00000425543 193 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 NFU1P2-201ENST00000448700 469 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.49□□□□□ -2.17
XRCC1P18887 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 RN7SKP210-201ENST00000459176 261 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 FO393415.2-201ENST00000480085 343 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 ACA59.1-201ENST00000515966 143 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.49□□□□□ -2.17
XRCC1P18887 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.49□□□□□ -2.17
XRCC1P18887 MIR5094-201ENST00000578766 85 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 MIR3672-201ENST00000584290 82 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 AL512598.1-201ENST00000610158 273 ntBASIC1.49□□□□□ -2.17
XRCC1P18887 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.49□□□□□ -2.17
XRCC1P18887 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.49□□□□□ -2.17
XRCC1P18887 SNORD50.1-201ENST00000362987 71 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 RNU6-112P-201ENST00000363599 104 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 SNORD115-8-201ENST00000363856 82 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 SNORD115-32-201ENST00000364079 82 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 SNORD115-38-201ENST00000365037 82 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 SNORD116-11-201ENST00000383882 92 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 Y_RNA.554-201ENST00000384672 102 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 MIR30A-201ENST00000385092 71 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 EBAG9P1-201ENST00000418955 543 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.48□□□□□ -2.17
XRCC1P18887 AC079354.2-201ENST00000453523 154 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 AC010409.1-201ENST00000487382 476 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.48□□□□□ -2.17
XRCC1P18887 RRN3P3-201ENST00000549207 578 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 AP003465.2-201ENST00000602571 373 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 AC069114.2-201ENST00000604699 304 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 AC124303.1-201ENST00000605703 360 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 AC019193.3-201ENST00000609144 554 ntBASIC1.48□□□□□ -2.17
XRCC1P18887 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.48□□□□□ -2.17
XRCC1P18887 RNU6-137P-201ENST00000363680 108 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 RNU4-12P-201ENST00000365233 139 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 RNU6-245P-201ENST00000384020 107 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 RNU6-1013P-201ENST00000384180 107 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 RNU6-975P-201ENST00000384296 105 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 RNU6-1235P-201ENST00000384559 107 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 MIR517A-201ENST00000385001 87 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 MIR586-201ENST00000385035 97 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 Y_RNA.595-201ENST00000410403 105 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 MTCO3P8-201ENST00000453691 755 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 RNU6-498P-201ENST00000459468 107 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 RNU6-344P-201ENST00000516635 111 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 SNORA31.24-201ENST00000517232 57 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.47□□□□□ -2.17
XRCC1P18887 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
XRCC1P18887 AL353149.1-201ENST00000610667 244 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms