Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL6A2P12110 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL6A2P12110 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.19□□□□□ -1.9
COL6A2P12110 Z83843.1-201ENST00000604070 3685 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 RNU6-886P-201ENST00000384319 105 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 RNU6-1289P-201ENST00000384431 106 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 MIR491-201ENST00000384877 84 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 MIR29B2-201ENST00000385055 81 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 MIR34B-201ENST00000385076 84 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 SUMO1P2-201ENST00000452524 304 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 SNORD116-28-201ENST00000516123 91 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 RNU6-155P-201ENST00000516347 100 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.19□□□□□ -1.9
COL6A2P12110 AC103810.1-201ENST00000579873 453 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 U3.45-201ENST00000607547 219 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 AC096577.2-201ENST00000611455 153 ntBASIC3.19□□□□□ -1.9
COL6A2P12110 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL6A2P12110 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL6A2P12110 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
COL6A2P12110 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.18□□□□□ -1.9
COL6A2P12110 AL049781.1-201ENST00000623195 3585 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 Y_RNA.270-201ENST00000364693 104 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 RNU6-1248P-201ENST00000391096 64 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.18□□□□□ -1.9
COL6A2P12110 RNU6-191P-201ENST00000516295 94 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 SNORA70.24-201ENST00000517233 118 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.18□□□□□ -1.9
COL6A2P12110 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
COL6A2P12110 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.18□□□□□ -1.9
COL6A2P12110 AC008739.2-201ENST00000597006 317 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 RPL30P11-203ENST00000598995 310 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 UCA1.1-201ENST00000620952 75 ntBASIC3.18□□□□□ -1.9
COL6A2P12110 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL6A2P12110 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL6A2P12110 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.18□□□□□ -1.9
COL6A2P12110 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
COL6A2P12110 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL6A2P12110 RNU6-486P-201ENST00000363116 107 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 RNU6-454P-201ENST00000364292 107 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 MICF-203ENST00000432679 129 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 RPS12P18-201ENST00000442381 270 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 SCARNA17.1-201ENST00000516211 143 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 SCARNA17.2-201ENST00000516334 143 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 Y_RNA.679-201ENST00000516416 91 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 HSPE1P18-201ENST00000517602 280 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 MIR3200-201ENST00000580767 85 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 AC006380.1-201ENST00000603598 186 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 SCARNA17.4-201ENST00000614296 143 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 AC073349.3-201ENST00000617616 186 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 AC008873.1-201ENST00000625051 138 ntBASIC3.17□□□□□ -1.9
COL6A2P12110 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL6A2P12110 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
COL6A2P12110 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.16□□□□□ -1.9
COL6A2P12110 U3.8-201ENST00000363675 217 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 SNORD87-201ENST00000364849 89 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 AL031121.1-201ENST00000406553 254 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 TOMM22P2-201ENST00000430735 237 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.16□□□□□ -1.9
COL6A2P12110 AC104332.1-201ENST00000440471 797 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 UQCRHP3-201ENST00000451503 251 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 RN7SL75P-201ENST00000461926 281 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 RPL31P41-201ENST00000477967 372 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 RNU6-436P-201ENST00000516171 114 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.16□□□□□ -1.9
COL6A2P12110 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.16□□□□□ -1.9
COL6A2P12110 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
COL6A2P12110 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL6A2P12110 AC073346.2-201ENST00000624724 2058 ntBASIC3.16□□□□□ -1.9
COL6A2P12110 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL6A2P12110 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL6A2P12110 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL6A2P12110 RNU4-80P-201ENST00000363200 141 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 Y_RNA.150-201ENST00000363562 102 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 RNU6-662P-201ENST00000384253 104 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 PCNPP3-201ENST00000393579 471 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 U3.40-201ENST00000408706 208 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.15□□□□□ -1.91
COL6A2P12110 RN7SKP220-201ENST00000410611 288 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 AC244505.4-201ENST00000434905 287 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 RPL23AP58-201ENST00000440453 469 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 SSXP5-201ENST00000443473 287 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 RNU6-107P-201ENST00000516643 102 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 AC024405.2-202ENST00000532731 184 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 AP002392.1-201ENST00000537692 208 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
COL6A2P12110 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
COL6A2P12110 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
COL6A2P12110 MIR2682-201ENST00000580305 110 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 AL670379.2-201ENST00000604983 252 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.15□□□□□ -1.91
COL6A2P12110 uc_338.25-201ENST00000613756 156 ntBASIC3.15□□□□□ -1.91
COL6A2P12110 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL6A2P12110 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL6A2P12110 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL6A2P12110 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms