Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NDUFB9P3-201ENST00000521269 501 ntBASIC3.82□□□□□ -1.8
RARAP10276 RPL17P51-201ENST00000605218 238 ntBASIC3.82□□□□□ -1.8
RARAP10276 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
RARAP10276 AP000553.6-201ENST00000641242 118 ntBASIC3.82□□□□□ -1.8
RARAP10276 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.82□□□□□ -1.8
RARAP10276 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RARAP10276 AC010680.1-201ENST00000590024 3590 ntBASIC3.82□□□□□ -1.8
RARAP10276 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.82□□□□□ -1.8
RARAP10276 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.81□□□□□ -1.8
RARAP10276 CENPCP1-201ENST00000533085 2578 ntBASIC3.81□□□□□ -1.8
RARAP10276 MIR208A-201ENST00000362287 71 ntBASIC3.81□□□□□ -1.8
RARAP10276 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RARAP10276 Y_RNA.525-201ENST00000384570 113 ntBASIC3.81□□□□□ -1.8
RARAP10276 RNU6-429P-201ENST00000384582 108 ntBASIC3.81□□□□□ -1.8
RARAP10276 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RARAP10276 AC006989.1-201ENST00000427212 131 ntBASIC3.81□□□□□ -1.8
RARAP10276 RPL23AP7-203ENST00000449021 469 ntBASIC3.81□□□□□ -1.8
RARAP10276 EEF1B2P7-201ENST00000451177 676 ntBASIC3.81□□□□□ -1.8
RARAP10276 CENPBD1P1-201ENST00000464061 469 ntBASIC3.81□□□□□ -1.8
RARAP10276 HMGN2P9-201ENST00000476875 229 ntBASIC3.81□□□□□ -1.8
RARAP10276 PDCD5P2-201ENST00000507570 312 ntBASIC3.81□□□□□ -1.8
RARAP10276 RAC1P5-201ENST00000512182 576 ntBASIC3.81□□□□□ -1.8
RARAP10276 RN7SKP179-201ENST00000516126 217 ntBASIC3.81□□□□□ -1.8
RARAP10276 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.81□□□□□ -1.8
RARAP10276 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.81□□□□□ -1.8
RARAP10276 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.81□□□□□ -1.8
RARAP10276 AF117829.1-206ENST00000621883 3802 ntBASIC3.81□□□□□ -1.8
RARAP10276 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RARAP10276 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RARAP10276 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
RARAP10276 SNORA63.4-201ENST00000362763 126 ntBASIC3.8□□□□□ -1.8
RARAP10276 RNU6-915P-201ENST00000364943 103 ntBASIC3.8□□□□□ -1.8
RARAP10276 SNORA62.3-201ENST00000365110 153 ntBASIC3.8□□□□□ -1.8
RARAP10276 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RARAP10276 MIR873-201ENST00000401120 77 ntBASIC3.8□□□□□ -1.8
RARAP10276 RNU6-1064P-201ENST00000410626 104 ntBASIC3.8□□□□□ -1.8
RARAP10276 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.8□□□□□ -1.8
RARAP10276 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.8□□□□□ -1.8
RARAP10276 SNRPGP5-201ENST00000456003 220 ntBASIC3.8□□□□□ -1.8
RARAP10276 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.8□□□□□ -1.8
RARAP10276 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.8□□□□□ -1.8
RARAP10276 AL138880.2-201ENST00000616214 239 ntBASIC3.8□□□□□ -1.8
RARAP10276 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RARAP10276 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RARAP10276 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.8□□□□□ -1.8
RARAP10276 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RARAP10276 MFSD8-236ENST00000641509 4050 ntBASIC3.8□□□□□ -1.8
RARAP10276 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.79□□□□□ -1.8
RARAP10276 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RARAP10276 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.79□□□□□ -1.8
RARAP10276 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
RARAP10276 Y_RNA.111-201ENST00000363248 100 ntBASIC3.79□□□□□ -1.8
RARAP10276 SNORD45.3-201ENST00000363836 72 ntBASIC3.79□□□□□ -1.8
RARAP10276 SNORA51.4-201ENST00000364993 124 ntBASIC3.79□□□□□ -1.8
RARAP10276 SNORD116-13-201ENST00000384408 92 ntBASIC3.79□□□□□ -1.8
RARAP10276 U8.11-201ENST00000384699 133 ntBASIC3.79□□□□□ -1.8
RARAP10276 MIR518C-201ENST00000384822 101 ntBASIC3.79□□□□□ -1.8
RARAP10276 RNY4P18-201ENST00000391107 89 ntBASIC3.79□□□□□ -1.8
RARAP10276 AL355796.1-201ENST00000406706 323 ntBASIC3.79□□□□□ -1.8
RARAP10276 MIR1278-201ENST00000408753 81 ntBASIC3.79□□□□□ -1.8
RARAP10276 YME1L1P1-201ENST00000429435 297 ntBASIC3.79□□□□□ -1.8
RARAP10276 U8.18-201ENST00000459285 133 ntBASIC3.79□□□□□ -1.8
RARAP10276 RNU6-1337P-201ENST00000516525 95 ntBASIC3.79□□□□□ -1.8
RARAP10276 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.79□□□□□ -1.8
RARAP10276 AC079598.5-201ENST00000547460 117 ntBASIC3.79□□□□□ -1.8
RARAP10276 AC090049.2-201ENST00000550377 109 ntBASIC3.79□□□□□ -1.8
RARAP10276 AP003357.1-201ENST00000604497 148 ntBASIC3.79□□□□□ -1.8
RARAP10276 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RARAP10276 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.79□□□□□ -1.8
RARAP10276 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.79□□□□□ -1.8
RARAP10276 AL159152.1-201ENST00000635019 2587 ntBASIC3.79□□□□□ -1.8
RARAP10276 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RARAP10276 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.79□□□□□ -1.8
RARAP10276 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RARAP10276 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RARAP10276 SNORD32B-201ENST00000364460 84 ntBASIC3.78□□□□□ -1.8
RARAP10276 RNU6-1082P-201ENST00000364574 107 ntBASIC3.78□□□□□ -1.8
RARAP10276 RNU6-476P-201ENST00000384726 107 ntBASIC3.78□□□□□ -1.8
RARAP10276 AL139095.1-201ENST00000404326 391 ntBASIC3.78□□□□□ -1.8
RARAP10276 Y_RNA.622-201ENST00000411091 108 ntBASIC3.78□□□□□ -1.8
RARAP10276 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.78□□□□□ -1.8
RARAP10276 AL121890.1-201ENST00000435457 205 ntBASIC3.78□□□□□ -1.8
RARAP10276 RPL36AP48-201ENST00000485521 314 ntBASIC3.78□□□□□ -1.8
RARAP10276 RNA5SP76-201ENST00000516277 87 ntBASIC3.78□□□□□ -1.8
RARAP10276 Y_RNA.712-201ENST00000517011 92 ntBASIC3.78□□□□□ -1.8
RARAP10276 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.78□□□□□ -1.8
RARAP10276 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
RARAP10276 AL031274.2-201ENST00000599419 203 ntBASIC3.78□□□□□ -1.8
RARAP10276 AL161756.2-201ENST00000604597 246 ntBASIC3.78□□□□□ -1.8
RARAP10276 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.78□□□□□ -1.8
RARAP10276 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.78□□□□□ -1.8
RARAP10276 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RARAP10276 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
RARAP10276 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
RARAP10276 AC002546.1-201ENST00000588041 2504 ntBASIC3.77□□□□□ -1.81
RARAP10276 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.77□□□□□ -1.81
RARAP10276 RNU6-597P-201ENST00000365620 102 ntBASIC3.77□□□□□ -1.81
RARAP10276 SNORA20B-201ENST00000384220 132 ntBASIC3.77□□□□□ -1.81
RARAP10276 RNU2-37P-201ENST00000410695 177 ntBASIC3.77□□□□□ -1.81
RARAP10276 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms