Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNU6-1240P-201ENST00000365155 104 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 SNORA36.2-201ENST00000384004 127 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 Y_RNA.576-201ENST00000384781 102 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 MIR936-201ENST00000401264 98 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 RNA5SP222-201ENST00000411039 105 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 RNU6-57P-201ENST00000411348 103 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 RPS26P42-201ENST00000413485 326 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.04□□□□□ -2.4
CXCL1P09341 AC005002.2-201ENST00000438228 269 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 AC104332.1-201ENST00000440471 797 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 STAG3L5P-204ENST00000443759 179 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 RNU7-57P-201ENST00000459540 60 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.04□□□□□ -2.4
CXCL1P09341 AC116347.2-201ENST00000514912 523 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 SNORA19.3-201ENST00000516165 130 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 RNU6-1223P-201ENST00000517124 104 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 AP003716.2-201ENST00000528260 108 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 MIR4431-201ENST00000579990 94 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 MIR5006-201ENST00000583027 110 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.04□□□□□ -2.4
CXCL1P09341 BNIP3P40-201ENST00000596017 556 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 SEPT14P17-201ENST00000617978 177 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 AC138649.3-201ENST00000622154 254 ntBASIC0.04□□□□□ -2.4
CXCL1P09341 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
CXCL1P09341 RNA5SP264-201ENST00000363115 107 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 RNU6-931P-201ENST00000363850 107 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 Y_RNA.302-201ENST00000364997 102 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 SNORD115-7-201ENST00000365306 82 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 RNU6-424P-201ENST00000384367 105 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 RNA5SP193-201ENST00000410353 107 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 RPS27AP14-201ENST00000422868 454 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 EXOSC3P1-201ENST00000448649 500 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.03□□□□□ -2.4
CXCL1P09341 RNU6-221P-201ENST00000459541 99 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.03□□□□□ -2.4
CXCL1P09341 AL138726.1-201ENST00000614873 333 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 snoZ196.1-201ENST00000625269 89 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 AC100810.6-201ENST00000638068 285 ntBASIC0.03□□□□□ -2.4
CXCL1P09341 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.03□□□□□ -2.4
CXCL1P09341 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.02□□□□□ -2.41
CXCL1P09341 RNU6-809P-201ENST00000384461 107 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 CALM2P3-201ENST00000400429 449 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 MIR1295A-201ENST00000408463 79 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 AC004854.1-201ENST00000440356 349 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 RPS20P10-201ENST00000451209 253 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 AC079140.5-201ENST00000507882 310 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.02□□□□□ -2.41
CXCL1P09341 RNU7-99P-201ENST00000516271 62 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
CXCL1P09341 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.02□□□□□ -2.41
CXCL1P09341 AL359999.1-201ENST00000604513 294 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.02□□□□□ -2.41
CXCL1P09341 AL390237.1-201ENST00000404226 1415 ntBASIC0.02□□□□□ -2.41
CXCL1P09341 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.01□□□□□ -2.41
CXCL1P09341 RNU6-715P-201ENST00000365204 103 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 RNU6-116P-201ENST00000384042 109 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 Y_RNA.480-201ENST00000384364 102 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 RNA5SP219-201ENST00000390940 113 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 RPS3AP3-201ENST00000411933 242 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 AC106883.1-201ENST00000418805 562 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 ELOCP4-201ENST00000420090 333 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 AC067940.1-201ENST00000458411 300 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 AC116562.3-201ENST00000506136 177 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 SNORD111.1-201ENST00000516421 86 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 AC068587.5-201ENST00000528506 175 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 AC103996.1-201ENST00000555468 102 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.01□□□□□ -2.41
CXCL1P09341 AC023827.1-201ENST00000569247 97 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 AC234772.3-201ENST00000602277 528 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 U6.73-201ENST00000619194 103 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 AC008873.1-201ENST00000625051 138 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.01□□□□□ -2.41
CXCL1P09341 MTND5P17-201ENST00000418405 1603 ntBASIC0.01□□□□□ -2.41
CXCL1P09341 RNU4-92P-201ENST00000363783 136 ntBASIC0□□□□□ -2.41
CXCL1P09341 RNU6-1303P-201ENST00000364841 107 ntBASIC0□□□□□ -2.41
CXCL1P09341 Y_RNA.330-201ENST00000365230 109 ntBASIC0□□□□□ -2.41
CXCL1P09341 RNU6-827P-201ENST00000365553 106 ntBASIC0□□□□□ -2.41
CXCL1P09341 RNY1P8-201ENST00000383970 114 ntBASIC0□□□□□ -2.41
CXCL1P09341 SNORA67.2-201ENST00000384300 149 ntBASIC0□□□□□ -2.41
CXCL1P09341 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0□□□□□ -2.41
CXCL1P09341 RNA5SP511-201ENST00000410487 115 ntBASIC0□□□□□ -2.41
CXCL1P09341 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0□□□□□ -2.41
CXCL1P09341 MTATP6P16-201ENST00000434543 526 ntBASIC0□□□□□ -2.41
CXCL1P09341 RNU6-1132P-201ENST00000459214 107 ntBASIC0□□□□□ -2.41
CXCL1P09341 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0□□□□□ -2.41
CXCL1P09341 SNRPGP20-201ENST00000604477 205 ntBASIC0□□□□□ -2.41
CXCL1P09341 AC007014.2-201ENST00000615581 479 ntBASIC0□□□□□ -2.41
CXCL1P09341 MIR924-201ENST00000638017 53 ntBASIC0□□□□□ -2.41
CXCL1P09341 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CXCL1P09341 MIR103A2-201ENST00000362154 78 ntBASIC-0.01□□□□□ -2.41
CXCL1P09341 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.01□□□□□ -2.41
CXCL1P09341 SNORD105-201ENST00000386910 85 ntBASIC-0.01□□□□□ -2.41
CXCL1P09341 RNU6-757P-201ENST00000410334 100 ntBASIC-0.01□□□□□ -2.41
CXCL1P09341 AC004866.1-201ENST00000411748 78 ntBASIC-0.01□□□□□ -2.41
CXCL1P09341 MTCO2P23-201ENST00000425216 680 ntBASIC-0.01□□□□□ -2.41
CXCL1P09341 CALM2P4-201ENST00000430810 426 ntBASIC-0.01□□□□□ -2.41
CXCL1P09341 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.01□□□□□ -2.41
CXCL1P09341 MTCO2P6-201ENST00000463134 685 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms