Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SNORA77B-201ENST00000578179 125 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AC023043.2-201ENST00000589678 1026 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AC005858.4-201ENST00000623191 700 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 SCARNA4-201ENST00000629045 128 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AC095038.3-201ENST00000634439 195 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 ZNF204P-201ENST00000416749 2397 ntBASIC1.11□□□□□ -2.23
HLA-DQA1P01909 AC006026.1-201ENST00000444025 1803 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 RNU6-1305P-201ENST00000364353 104 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 RNU6-1019P-201ENST00000364424 107 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 Y_RNA.318-201ENST00000365131 97 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 RNU6-975P-201ENST00000384296 105 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 MIR520A-201ENST00000384862 85 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 AL121890.1-201ENST00000435457 205 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 UBE2V1P8-201ENST00000437166 265 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 AC009237.7-201ENST00000447357 229 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 MTCO2P30-201ENST00000503662 364 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 RNU6-948P-201ENST00000516374 107 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 RNA5SP61-201ENST00000516453 100 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 AC026470.2-201ENST00000561492 181 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 AC093783.1-201ENST00000612976 329 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 MIR338-201ENST00000636369 67 ntBASIC1.1□□□□□ -2.23
HLA-DQA1P01909 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HLA-DQA1P01909 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
HLA-DQA1P01909 SNORA33-201ENST00000363664 130 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 SNORA67.2-201ENST00000384300 149 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 Y_RNA.530-201ENST00000384587 101 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 RNU2-7P-201ENST00000410794 178 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 ZNF885P-201ENST00000420174 1098 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 AL358453.1-201ENST00000422522 250 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 AL513185.2-201ENST00000425543 193 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 SDAD1P3-201ENST00000427380 333 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 MTND3P21-201ENST00000433774 331 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 AC015922.2-201ENST00000435593 184 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DQA1P01909 RPL26P26-201ENST00000480251 434 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 HMGN1P13-201ENST00000505795 138 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 AC025465.3-201ENST00000510570 311 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 RNU6-250P-201ENST00000516958 103 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 SNRPGP20-201ENST00000604477 205 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 AC069114.2-201ENST00000604699 304 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.09□□□□□ -2.23
HLA-DQA1P01909 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 AC137590.2-201ENST00000619709 240 ntBASIC1.09□□□□□ -2.23
HLA-DQA1P01909 Y_RNA.135-201ENST00000363439 95 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 RNU6-271P-201ENST00000363858 105 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.212-201ENST00000364177 102 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 SNORA63D-201ENST00000364359 132 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.402-201ENST00000383972 102 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.414-201ENST00000384011 101 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 MIR32-201ENST00000384965 70 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 MIR517A-201ENST00000385001 87 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 MIR758-201ENST00000390227 88 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 RNU6-360P-201ENST00000390944 104 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AL445305.1-201ENST00000432577 575 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.08□□□□□ -2.24
HLA-DQA1P01909 snoU13.9-201ENST00000458927 103 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 RNU7-57P-201ENST00000459540 60 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DQA1P01909 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AC109635.3-201ENST00000529536 185 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.08□□□□□ -2.24
HLA-DQA1P01909 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HLA-DQA1P01909 SNORD53B-201ENST00000577887 78 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 MIR3942-201ENST00000585264 109 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DQA1P01909 POLR3GP2-201ENST00000588366 668 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AC019193.3-201ENST00000609144 554 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AC006504.8-201ENST00000621046 635 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 MIR7843-201ENST00000622274 79 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AC090617.10-201ENST00000624308 134 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AC091812.1-201ENST00000432235 1948 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.08□□□□□ -2.24
HLA-DQA1P01909 MTND4P5-201ENST00000435821 1374 ntBASIC1.08□□□□□ -2.24
HLA-DQA1P01909 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.3-201ENST00000362331 103 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 Y_RNA.100-201ENST00000363141 102 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNY4P14-201ENST00000363656 96 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNU6-414P-201ENST00000363705 104 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNA5SP190-201ENST00000365222 118 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 SNORD116-11-201ENST00000383882 92 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNU6-1235P-201ENST00000384559 107 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 MIR181A1-201ENST00000385026 110 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 SNORA26.9-201ENST00000391322 122 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 MIR1267-201ENST00000408723 78 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNA5SP504-201ENST00000410676 117 ntBASIC1.07□□□□□ -2.24
HLA-DQA1P01909 RNU6-1148P-201ENST00000410992 104 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms