Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SEPT14P19-203ENST00000633205 211 ntBASIC0.46□□□□□ -2.34
HLA-DRAP01903 ELL2P3-201ENST00000457883 1602 ntBASIC0.46□□□□□ -2.34
HLA-DRAP01903 RNU5F-7P-201ENST00000363696 115 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 RNU4-12P-201ENST00000365233 139 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 Y_RNA.363-201ENST00000365529 113 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 Y_RNA.508-201ENST00000384502 114 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 MIR586-201ENST00000385035 97 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 MIR122-201ENST00000385044 85 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 MIR454-201ENST00000390180 115 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 RNU1-139P-201ENST00000391307 165 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 AC008134.1-201ENST00000420943 193 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 TIMM9P3-201ENST00000428659 274 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 AC245047.3-201ENST00000429428 127 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.45□□□□□ -2.34
HLA-DRAP01903 AC009237.7-201ENST00000447357 229 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 snoU13.18-201ENST00000459483 104 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 RNU6-947P-201ENST00000516264 106 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 RNU6-1069P-201ENST00000516612 133 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 SNORA25.17-201ENST00000517184 124 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.45□□□□□ -2.34
HLA-DRAP01903 AL603839.4-201ENST00000624658 1005 ntBASIC0.45□□□□□ -2.34
HLA-DRAP01903 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.45□□□□□ -2.34
HLA-DRAP01903 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 MIR660-201ENST00000385235 97 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 MIR653-201ENST00000385279 96 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 RNU6-1106P-201ENST00000390845 107 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 RNU6-440P-201ENST00000390882 105 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 MRPL42P3-201ENST00000401492 326 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AL451046.2-201ENST00000403074 277 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 RNU6-57P-201ENST00000411348 103 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC104850.1-201ENST00000435940 476 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AL606662.1-201ENST00000445763 553 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRAP01903 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.44□□□□□ -2.34
HLA-DRAP01903 RNU7-90P-201ENST00000459216 62 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRAP01903 HMGB1P29-201ENST00000505659 499 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 RNU2-69P-201ENST00000516061 100 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 Y_RNA.673-201ENST00000516306 88 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC090049.2-201ENST00000550377 109 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC022217.4-201ENST00000604389 163 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC012557.2-201ENST00000605919 418 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC097065.2-201ENST00000608159 533 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC091304.9-201ENST00000612091 226 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 AL078595.3-201ENST00000623815 1166 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 CASC19-280ENST00000642102 1351 ntBASIC0.44□□□□□ -2.34
HLA-DRAP01903 RNU6-199P-201ENST00000362954 107 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 U3.8-201ENST00000363675 217 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 MIR10B-201ENST00000385011 110 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 MIR936-201ENST00000401264 98 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 AL355143.1-201ENST00000407101 841 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DRAP01903 RPS26P42-201ENST00000413485 326 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 GPR143P-201ENST00000434155 205 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 RNU4-57P-201ENST00000515980 135 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 AC018659.1-201ENST00000551083 169 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 AC004584.2-201ENST00000570407 410 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 MIR4775-201ENST00000581168 75 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 AC002044.1-201ENST00000606707 158 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 AC068792.1-201ENST00000621354 417 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
HLA-DRAP01903 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HLA-DRAP01903 RNU6-266P-201ENST00000364225 107 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 RNU6-1305P-201ENST00000364353 104 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HLA-DRAP01903 SNORD41-201ENST00000386967 70 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 SNORD70.1-201ENST00000391007 85 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 RNA5SP193-201ENST00000410353 107 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 AL445305.1-201ENST00000432577 575 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 RPEP5-201ENST00000441137 268 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.42□□□□□ -2.34
HLA-DRAP01903 snoU13.6-201ENST00000458785 104 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 RNU7-21P-201ENST00000459430 62 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 RNU7-57P-201ENST00000459540 60 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.42□□□□□ -2.34
HLA-DRAP01903 RPS26P48-201ENST00000491713 339 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 RNU6-496P-201ENST00000516145 99 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.42□□□□□ -2.34
HLA-DRAP01903 MIR4711-201ENST00000578274 70 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 MTND4P5-201ENST00000435821 1374 ntBASIC0.42□□□□□ -2.34
HLA-DRAP01903 RNU6-1240P-201ENST00000365155 104 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 RNU6-1029P-201ENST00000384109 107 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 MTND3P17-201ENST00000416968 344 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 AC098592.1-201ENST00000419352 333 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.41□□□□□ -2.34
HLA-DRAP01903 CETN4P-201ENST00000432407 469 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 GMFBP1-201ENST00000467831 427 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 AC010493.1-201ENST00000513479 292 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 RNU2-46P-201ENST00000517038 113 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 AP003072.2-201ENST00000527756 676 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.41□□□□□ -2.34
HLA-DRAP01903 AC080078.2-201ENST00000603766 501 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 AP000907.4-201ENST00000604143 237 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 snoZ196.1-201ENST00000625269 89 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 U6.108-201ENST00000637764 58 ntBASIC0.41□□□□□ -2.34
HLA-DRAP01903 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
HLA-DRAP01903 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
HLA-DRAP01903 RNU6-500P-201ENST00000362349 107 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms