Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC093852.1-201ENST00000503587 266 ntBASIC2.39□□□□□ -2.03
LDLRP01130 AC091874.1-201ENST00000511402 339 ntBASIC2.39□□□□□ -2.03
LDLRP01130 RNU2-53P-201ENST00000516257 147 ntBASIC2.39□□□□□ -2.03
LDLRP01130 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.39□□□□□ -2.03
LDLRP01130 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.39□□□□□ -2.03
LDLRP01130 HSPE1P4-201ENST00000550617 308 ntBASIC2.39□□□□□ -2.03
LDLRP01130 AC023824.2-201ENST00000566185 400 ntBASIC2.39□□□□□ -2.03
LDLRP01130 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.39□□□□□ -2.03
LDLRP01130 AC006600.1-201ENST00000572529 153 ntBASIC2.39□□□□□ -2.03
LDLRP01130 MIR5696-201ENST00000578474 85 ntBASIC2.39□□□□□ -2.03
LDLRP01130 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
LDLRP01130 AC025754.2-201ENST00000606491 432 ntBASIC2.39□□□□□ -2.03
LDLRP01130 AC002543.1-201ENST00000299783 1954 ntBASIC2.39□□□□□ -2.03
LDLRP01130 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.39□□□□□ -2.03
LDLRP01130 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LDLRP01130 AC009541.1-201ENST00000438279 2662 ntBASIC2.38□□□□□ -2.03
LDLRP01130 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LDLRP01130 RNA5SP289-201ENST00000362332 137 ntBASIC2.38□□□□□ -2.03
LDLRP01130 RNU6-227P-201ENST00000362865 103 ntBASIC2.38□□□□□ -2.03
LDLRP01130 SNORD50.1-201ENST00000362987 71 ntBASIC2.38□□□□□ -2.03
LDLRP01130 Y_RNA.105-201ENST00000363182 111 ntBASIC2.38□□□□□ -2.03
LDLRP01130 Y_RNA.152-201ENST00000363578 100 ntBASIC2.38□□□□□ -2.03
LDLRP01130 SNORA38-201ENST00000363946 132 ntBASIC2.38□□□□□ -2.03
LDLRP01130 Y_RNA.276-201ENST00000364732 109 ntBASIC2.38□□□□□ -2.03
LDLRP01130 RNU6-708P-201ENST00000384217 107 ntBASIC2.38□□□□□ -2.03
LDLRP01130 Y_RNA.551-201ENST00000384661 102 ntBASIC2.38□□□□□ -2.03
LDLRP01130 AL591034.2-201ENST00000402839 359 ntBASIC2.38□□□□□ -2.03
LDLRP01130 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.38□□□□□ -2.03
LDLRP01130 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.38□□□□□ -2.03
LDLRP01130 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.38□□□□□ -2.03
LDLRP01130 EIF4EP4-201ENST00000424916 578 ntBASIC2.38□□□□□ -2.03
LDLRP01130 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.38□□□□□ -2.03
LDLRP01130 FCF1P4-201ENST00000448326 183 ntBASIC2.38□□□□□ -2.03
LDLRP01130 RNU6-1132P-201ENST00000459214 107 ntBASIC2.38□□□□□ -2.03
LDLRP01130 AC090515.1-201ENST00000465295 476 ntBASIC2.38□□□□□ -2.03
LDLRP01130 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.38□□□□□ -2.03
LDLRP01130 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.38□□□□□ -2.03
LDLRP01130 ACA59.1-201ENST00000515966 143 ntBASIC2.38□□□□□ -2.03
LDLRP01130 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
LDLRP01130 AC109329.1-201ENST00000518744 317 ntBASIC2.38□□□□□ -2.03
LDLRP01130 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.38□□□□□ -2.03
LDLRP01130 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.38□□□□□ -2.03
LDLRP01130 AC090517.1-201ENST00000569307 266 ntBASIC2.38□□□□□ -2.03
LDLRP01130 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.38□□□□□ -2.03
LDLRP01130 AC069294.1-201ENST00000608397 350 ntBASIC2.38□□□□□ -2.03
LDLRP01130 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.38□□□□□ -2.03
LDLRP01130 MIR7157-201ENST00000635801 60 ntBASIC2.38□□□□□ -2.03
LDLRP01130 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LDLRP01130 AC010615.1-201ENST00000594254 1764 ntBASIC2.38□□□□□ -2.03
LDLRP01130 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LDLRP01130 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.37□□□□□ -2.03
LDLRP01130 RNU6-595P-201ENST00000363944 107 ntBASIC2.37□□□□□ -2.03
LDLRP01130 SNORD32A-201ENST00000364805 84 ntBASIC2.37□□□□□ -2.03
LDLRP01130 Y_RNA.461-201ENST00000384263 103 ntBASIC2.37□□□□□ -2.03
LDLRP01130 Y_RNA.504-201ENST00000384481 104 ntBASIC2.37□□□□□ -2.03
LDLRP01130 MIR1289-2-201ENST00000408360 111 ntBASIC2.37□□□□□ -2.03
LDLRP01130 MIR548I3-201ENST00000408378 149 ntBASIC2.37□□□□□ -2.03
LDLRP01130 MIR548I1-201ENST00000408810 149 ntBASIC2.37□□□□□ -2.03
LDLRP01130 RNU6-130P-201ENST00000411112 103 ntBASIC2.37□□□□□ -2.03
LDLRP01130 AL135786.1-201ENST00000415892 214 ntBASIC2.37□□□□□ -2.03
LDLRP01130 MICF-203ENST00000432679 129 ntBASIC2.37□□□□□ -2.03
LDLRP01130 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.37□□□□□ -2.03
LDLRP01130 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.37□□□□□ -2.03
LDLRP01130 AL139109.1-201ENST00000455491 297 ntBASIC2.37□□□□□ -2.03
LDLRP01130 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.37□□□□□ -2.03
LDLRP01130 RPS29P27-201ENST00000463711 170 ntBASIC2.37□□□□□ -2.03
LDLRP01130 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.37□□□□□ -2.03
LDLRP01130 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.37□□□□□ -2.03
LDLRP01130 RNU6-897P-201ENST00000517135 105 ntBASIC2.37□□□□□ -2.03
LDLRP01130 AC007375.1-201ENST00000554513 578 ntBASIC2.37□□□□□ -2.03
LDLRP01130 AC105245.1-201ENST00000581934 244 ntBASIC2.37□□□□□ -2.03
LDLRP01130 MIR3128-201ENST00000581957 66 ntBASIC2.37□□□□□ -2.03
LDLRP01130 RPL30P11-203ENST00000598995 310 ntBASIC2.37□□□□□ -2.03
LDLRP01130 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LDLRP01130 AP000560.1-201ENST00000624150 1937 ntBASIC2.36□□□□□ -2.03
LDLRP01130 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LDLRP01130 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
LDLRP01130 RNU6-655P-201ENST00000362858 107 ntBASIC2.36□□□□□ -2.03
LDLRP01130 Y_RNA.123-201ENST00000363338 102 ntBASIC2.36□□□□□ -2.03
LDLRP01130 RNU6-1141P-201ENST00000364520 107 ntBASIC2.36□□□□□ -2.03
LDLRP01130 Y_RNA.288-201ENST00000364854 92 ntBASIC2.36□□□□□ -2.03
LDLRP01130 Y_RNA.489-201ENST00000384410 101 ntBASIC2.36□□□□□ -2.03
LDLRP01130 Y_RNA.518-201ENST00000384552 113 ntBASIC2.36□□□□□ -2.03
LDLRP01130 Y_RNA.562-201ENST00000384695 113 ntBASIC2.36□□□□□ -2.03
LDLRP01130 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
LDLRP01130 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LDLRP01130 RNU6-220P-201ENST00000390919 107 ntBASIC2.36□□□□□ -2.03
LDLRP01130 RNU6-121P-201ENST00000410525 99 ntBASIC2.36□□□□□ -2.03
LDLRP01130 RNU2-38P-201ENST00000410856 79 ntBASIC2.36□□□□□ -2.03
LDLRP01130 AP000275.1-201ENST00000411943 390 ntBASIC2.36□□□□□ -2.03
LDLRP01130 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.36□□□□□ -2.03
LDLRP01130 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.36□□□□□ -2.03
LDLRP01130 AC244670.1-201ENST00000436879 112 ntBASIC2.36□□□□□ -2.03
LDLRP01130 AC011753.1-201ENST00000451001 220 ntBASIC2.36□□□□□ -2.03
LDLRP01130 MTCO3P8-201ENST00000453691 755 ntBASIC2.36□□□□□ -2.03
LDLRP01130 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.36□□□□□ -2.03
LDLRP01130 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.36□□□□□ -2.03
LDLRP01130 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.36□□□□□ -2.03
LDLRP01130 RNU6-397P-201ENST00000516226 104 ntBASIC2.36□□□□□ -2.03
LDLRP01130 RNU7-4P-201ENST00000516961 62 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms