Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ALDH1A1P00352 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ALDH1A1P00352 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ALDH1A1P00352 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ALDH1A1P00352 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ALDH1A1P00352 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
ALDH1A1P00352 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ALDH1A1P00352 Y_RNA.91-201ENST00000363042 107 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 SNORD96B-201ENST00000386148 79 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 SNORD78.1-201ENST00000390866 65 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 MIR873-201ENST00000401120 77 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 NDUFB4P6-201ENST00000436819 366 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.37□□□□□ -1.71
ALDH1A1P00352 RPS29P20-201ENST00000489592 171 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.37□□□□□ -1.71
ALDH1A1P00352 YPEL5P2-201ENST00000605553 359 ntBASIC4.37□□□□□ -1.71
ALDH1A1P00352 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ALDH1A1P00352 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ALDH1A1P00352 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ALDH1A1P00352 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ALDH1A1P00352 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
ALDH1A1P00352 RNU4-15P-201ENST00000362613 141 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 Y_RNA.634-201ENST00000364811 113 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 Y_RNA.323-201ENST00000365157 109 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 RNU6-1113P-201ENST00000384348 107 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 MIR493-201ENST00000385254 89 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 AC005326.1-201ENST00000429197 123 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 AC010469.1-201ENST00000463864 576 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.36□□□□□ -1.71
ALDH1A1P00352 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.36□□□□□ -1.71
ALDH1A1P00352 MIR3124-201ENST00000582636 67 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 AC005972.2-201ENST00000604690 348 ntBASIC4.36□□□□□ -1.71
ALDH1A1P00352 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ALDH1A1P00352 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ALDH1A1P00352 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 AL035425.3-201ENST00000564206 4996 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ALDH1A1P00352 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
ALDH1A1P00352 Y_RNA.219-201ENST00000364232 113 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 MIR624-201ENST00000385217 97 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 AL355796.1-201ENST00000406706 323 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 CALM2P4-201ENST00000430810 426 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 RPL39P34-201ENST00000477141 156 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.35□□□□□ -1.71
ALDH1A1P00352 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ALDH1A1P00352 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ALDH1A1P00352 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ALDH1A1P00352 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ALDH1A1P00352 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.35□□□□□ -1.71
ALDH1A1P00352 AC007256.1-201ENST00000392253 2765 ntBASIC4.35□□□□□ -1.71
ALDH1A1P00352 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
ALDH1A1P00352 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
ALDH1A1P00352 Y_RNA.40-201ENST00000362645 93 ntBASIC4.34□□□□□ -1.71
ALDH1A1P00352 MIR450A2-201ENST00000385022 100 ntBASIC4.34□□□□□ -1.71
ALDH1A1P00352 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.34□□□□□ -1.71
ALDH1A1P00352 RNU2-70P-201ENST00000410718 179 ntBASIC4.34□□□□□ -1.71
ALDH1A1P00352 HMGN2P21-201ENST00000447764 270 ntBASIC4.34□□□□□ -1.71
ALDH1A1P00352 RBMY2UP-201ENST00000453474 324 ntBASIC4.34□□□□□ -1.71
ALDH1A1P00352 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.34□□□□□ -1.71
ALDH1A1P00352 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.34□□□□□ -1.71
ALDH1A1P00352 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.34□□□□□ -1.71
ALDH1A1P00352 AC005086.4-201ENST00000623065 213 ntBASIC4.34□□□□□ -1.71
ALDH1A1P00352 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.34□□□□□ -1.71
ALDH1A1P00352 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ALDH1A1P00352 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ALDH1A1P00352 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.33□□□□□ -1.72
ALDH1A1P00352 AL136360.1-201ENST00000503377 1900 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ALDH1A1P00352 RNU6-529P-201ENST00000363383 104 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 Y_RNA.220-201ENST00000364244 109 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 MIR1185-2-201ENST00000408687 86 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 RNA5SP136-201ENST00000410906 107 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 RNU2-32P-201ENST00000411193 191 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 AL121890.1-201ENST00000435457 205 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 MTATP6P21-201ENST00000440681 189 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.33□□□□□ -1.72
ALDH1A1P00352 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.33□□□□□ -1.72
ALDH1A1P00352 AC008155.2-201ENST00000464337 397 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 UBE2DNL-203ENST00000474922 222 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 SNORD77.4-201ENST00000516158 81 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 RNU2-27P-201ENST00000516185 142 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 SNORA18.4-201ENST00000516440 124 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 AC134878.1-201ENST00000619901 243 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 AL035470.1-201ENST00000622571 220 ntBASIC4.33□□□□□ -1.72
ALDH1A1P00352 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ALDH1A1P00352 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ALDH1A1P00352 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.33□□□□□ -1.72
ALDH1A1P00352 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ALDH1A1P00352 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ALDH1A1P00352 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.33□□□□□ -1.72
ALDH1A1P00352 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.32□□□□□ -1.72
ALDH1A1P00352 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
ALDH1A1P00352 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ALDH1A1P00352 RNA5SP127-201ENST00000411051 133 ntBASIC4.32□□□□□ -1.72
ALDH1A1P00352 AC021205.2-201ENST00000480069 347 ntBASIC4.32□□□□□ -1.72
ALDH1A1P00352 AC078817.1-201ENST00000492623 435 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms