Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.85□□□□□ -1.95
SCAF4O95104 AC007536.1-201ENST00000533382 349 ntBASIC2.85□□□□□ -1.95
SCAF4O95104 AC079598.5-201ENST00000547460 117 ntBASIC2.85□□□□□ -1.95
SCAF4O95104 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.85□□□□□ -1.95
SCAF4O95104 MIR4444-1-201ENST00000581696 74 ntBASIC2.85□□□□□ -1.95
SCAF4O95104 MIR5187-201ENST00000583479 76 ntBASIC2.85□□□□□ -1.95
SCAF4O95104 MIR4444-2-201ENST00000584390 74 ntBASIC2.85□□□□□ -1.95
SCAF4O95104 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.85□□□□□ -1.95
SCAF4O95104 TCL6_2.1-201ENST00000615162 119 ntBASIC2.85□□□□□ -1.95
SCAF4O95104 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCAF4O95104 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
SCAF4O95104 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCAF4O95104 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.84□□□□□ -1.95
SCAF4O95104 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SCAF4O95104 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.84□□□□□ -1.95
SCAF4O95104 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCAF4O95104 RNU6-655P-201ENST00000362858 107 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 SNORD56.3-201ENST00000363507 71 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 Y_RNA.262-201ENST00000364641 102 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 SNORA18.2-201ENST00000383865 132 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 PTMAP2-201ENST00000397627 327 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SCAF4O95104 U3.40-201ENST00000408706 208 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 RNA5SP475-201ENST00000410568 110 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 RNU6-394P-201ENST00000410735 107 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 AL135790.2-201ENST00000437701 267 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 Y_RNA.637-201ENST00000459424 114 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 MTND5P41-201ENST00000517498 206 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 MIR5692C2-201ENST00000577959 77 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 AC068205.3-201ENST00000636385 468 ntBASIC2.84□□□□□ -1.95
SCAF4O95104 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
SCAF4O95104 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
SCAF4O95104 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.84□□□□□ -1.96
SCAF4O95104 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCAF4O95104 RNU1-109P-201ENST00000383960 147 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 RNU6-804P-201ENST00000384286 107 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCAF4O95104 MTCO2P33-201ENST00000402100 465 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 RNU6-1135P-201ENST00000411083 103 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.83□□□□□ -1.96
SCAF4O95104 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.83□□□□□ -1.96
SCAF4O95104 AC024067.1-201ENST00000426199 223 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.83□□□□□ -1.96
SCAF4O95104 RPL27AP5-201ENST00000469428 449 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.83□□□□□ -1.96
SCAF4O95104 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 HMGB3P3-201ENST00000510526 400 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 AP005660.1-201ENST00000522972 293 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
SCAF4O95104 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.83□□□□□ -1.96
SCAF4O95104 RNU1-30P-201ENST00000606575 163 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 SNORD11B-201ENST00000607707 90 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 UCA1.1-201ENST00000620952 75 ntBASIC2.83□□□□□ -1.96
SCAF4O95104 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCAF4O95104 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SCAF4O95104 AC068700.1-201ENST00000565862 3754 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 snoU2_19.1-201ENST00000362361 80 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 SNORD115-30-201ENST00000364117 82 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 RNU6-1180P-201ENST00000364935 107 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 RNY1P5-201ENST00000383890 115 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 SNORA12-201ENST00000391162 147 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 RPL32P35-201ENST00000415214 394 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 BTF3P11-201ENST00000426582 477 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAF4O95104 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAF4O95104 AL133162.1-201ENST00000463228 453 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 AC091021.1-201ENST00000468051 388 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAF4O95104 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAF4O95104 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAF4O95104 RNU7-200P-201ENST00000516105 62 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 SUMO2P18-201ENST00000518873 252 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 AC245166.1-201ENST00000521012 253 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAF4O95104 MIR3144-201ENST00000579460 79 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 MIR5006-201ENST00000583027 110 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.82□□□□□ -1.96
SCAF4O95104 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.82□□□□□ -1.96
SCAF4O95104 uc_338.14-201ENST00000613162 166 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 AC091953.5-201ENST00000622919 233 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 CR392039.5-201ENST00000623201 510 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
SCAF4O95104 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SCAF4O95104 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCAF4O95104 AC069528.2-201ENST00000624849 1991 ntBASIC2.81□□□□□ -1.96
SCAF4O95104 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCAF4O95104 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SCAF4O95104 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCAF4O95104 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SCAF4O95104 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SCAF4O95104 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCAF4O95104 Y_RNA.441-201ENST00000384123 112 ntBASIC2.81□□□□□ -1.96
SCAF4O95104 U8.12-201ENST00000384701 133 ntBASIC2.81□□□□□ -1.96
SCAF4O95104 MIR627-201ENST00000384979 97 ntBASIC2.81□□□□□ -1.96
SCAF4O95104 MIR200C-201ENST00000384980 68 ntBASIC2.81□□□□□ -1.96
SCAF4O95104 AL357139.1-201ENST00000407792 426 ntBASIC2.81□□□□□ -1.96
SCAF4O95104 RNU5E-9P-201ENST00000411164 104 ntBASIC2.81□□□□□ -1.96
SCAF4O95104 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.81□□□□□ -1.96
SCAF4O95104 RPL36AP48-201ENST00000485521 314 ntBASIC2.81□□□□□ -1.96
SCAF4O95104 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms