Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.26□□□□□ -2.37
PCF11O94913 RNU2-3P-201ENST00000410144 191 ntBASIC0.26□□□□□ -2.37
PCF11O94913 RNU6-387P-201ENST00000411331 105 ntBASIC0.26□□□□□ -2.37
PCF11O94913 USP9YP28-201ENST00000435142 589 ntBASIC0.26□□□□□ -2.37
PCF11O94913 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.26□□□□□ -2.37
PCF11O94913 AC008628.2-201ENST00000502605 298 ntBASIC0.26□□□□□ -2.37
PCF11O94913 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.26□□□□□ -2.37
PCF11O94913 AP002782.1-201ENST00000623107 614 ntBASIC0.26□□□□□ -2.37
PCF11O94913 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
PCF11O94913 MIR101-1-201ENST00000362265 75 ntBASIC0.25□□□□□ -2.37
PCF11O94913 RNU6-1305P-201ENST00000364353 104 ntBASIC0.25□□□□□ -2.37
PCF11O94913 RNU6-692P-201ENST00000384496 107 ntBASIC0.25□□□□□ -2.37
PCF11O94913 SNORA26.3-201ENST00000391119 136 ntBASIC0.25□□□□□ -2.37
PCF11O94913 AL136310.1-201ENST00000404926 654 ntBASIC0.25□□□□□ -2.37
PCF11O94913 AL034345.1-201ENST00000407768 123 ntBASIC0.25□□□□□ -2.37
PCF11O94913 CALM2P2-201ENST00000428512 440 ntBASIC0.25□□□□□ -2.37
PCF11O94913 RPL22P17-201ENST00000438729 315 ntBASIC0.25□□□□□ -2.37
PCF11O94913 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.25□□□□□ -2.37
PCF11O94913 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.25□□□□□ -2.37
PCF11O94913 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.25□□□□□ -2.37
PCF11O94913 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.25□□□□□ -2.37
PCF11O94913 AL391840.1-201ENST00000571144 367 ntBASIC0.25□□□□□ -2.37
PCF11O94913 MIR5695-201ENST00000579717 85 ntBASIC0.25□□□□□ -2.37
PCF11O94913 AC078795.3-201ENST00000602913 472 ntBASIC0.25□□□□□ -2.37
PCF11O94913 AC009994.1-201ENST00000606889 253 ntBASIC0.25□□□□□ -2.37
PCF11O94913 AC008250.2-201ENST00000615261 205 ntBASIC0.25□□□□□ -2.37
PCF11O94913 RNU6-25P-201ENST00000383873 107 ntBASIC0.24□□□□□ -2.37
PCF11O94913 Y_RNA.472-201ENST00000384322 102 ntBASIC0.24□□□□□ -2.37
PCF11O94913 RNU6-348P-201ENST00000384386 107 ntBASIC0.24□□□□□ -2.37
PCF11O94913 RNU6-15P-201ENST00000384534 107 ntBASIC0.24□□□□□ -2.37
PCF11O94913 RNU6-29P-201ENST00000384637 107 ntBASIC0.24□□□□□ -2.37
PCF11O94913 RNU6-417P-201ENST00000384712 107 ntBASIC0.24□□□□□ -2.37
PCF11O94913 AL451046.2-201ENST00000403074 277 ntBASIC0.24□□□□□ -2.37
PCF11O94913 SNORD99-201ENST00000408612 74 ntBASIC0.24□□□□□ -2.37
PCF11O94913 AC008521.1-201ENST00000587471 187 ntBASIC0.24□□□□□ -2.37
PCF11O94913 AC106754.2-201ENST00000623006 233 ntBASIC0.24□□□□□ -2.37
PCF11O94913 RNU6-552P-201ENST00000362869 119 ntBASIC0.23□□□□□ -2.37
PCF11O94913 RNU4-48P-201ENST00000365559 182 ntBASIC0.23□□□□□ -2.37
PCF11O94913 RNU6-793P-201ENST00000384233 104 ntBASIC0.23□□□□□ -2.37
PCF11O94913 RNA5SP109-201ENST00000391010 116 ntBASIC0.23□□□□□ -2.37
PCF11O94913 AC007283.2-201ENST00000424739 197 ntBASIC0.23□□□□□ -2.37
PCF11O94913 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
PCF11O94913 MTATP6P15-201ENST00000527233 835 ntBASIC0.23□□□□□ -2.37
PCF11O94913 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.23□□□□□ -2.37
PCF11O94913 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.23□□□□□ -2.37
PCF11O94913 AC064872.1-201ENST00000604823 1072 ntBASIC0.23□□□□□ -2.37
PCF11O94913 AC108747.1-201ENST00000609508 535 ntBASIC0.23□□□□□ -2.37
PCF11O94913 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.23□□□□□ -2.37
PCF11O94913 MIR8054-201ENST00000620877 86 ntBASIC0.23□□□□□ -2.37
PCF11O94913 SNORD116-13-201ENST00000384408 92 ntBASIC0.23□□□□□ -2.37
PCF11O94913 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
PCF11O94913 RNU6-440P-201ENST00000390882 105 ntBASIC0.23□□□□□ -2.37
PCF11O94913 SNORD89-201ENST00000390981 114 ntBASIC0.23□□□□□ -2.37
PCF11O94913 RNA5SP467-201ENST00000391274 118 ntBASIC0.23□□□□□ -2.37
PCF11O94913 AC090960.1-201ENST00000421072 306 ntBASIC0.23□□□□□ -2.37
PCF11O94913 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.23□□□□□ -2.37
PCF11O94913 AL133217.1-201ENST00000450980 425 ntBASIC0.23□□□□□ -2.37
PCF11O94913 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.23□□□□□ -2.37
PCF11O94913 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
PCF11O94913 Z98751.3-201ENST00000604447 521 ntBASIC0.23□□□□□ -2.37
PCF11O94913 AC013244.3-201ENST00000605614 388 ntBASIC0.23□□□□□ -2.37
PCF11O94913 AL121895.2-201ENST00000619558 447 ntBASIC0.23□□□□□ -2.37
PCF11O94913 AL157786.1-207ENST00000627771 695 ntBASIC0.23□□□□□ -2.37
PCF11O94913 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
PCF11O94913 RNU6-199P-201ENST00000362954 107 ntBASIC0.22□□□□□ -2.37
PCF11O94913 SNORD32A-201ENST00000364805 84 ntBASIC0.22□□□□□ -2.37
PCF11O94913 RNU6-945P-201ENST00000383947 107 ntBASIC0.22□□□□□ -2.37
PCF11O94913 RNU6-975P-201ENST00000384296 105 ntBASIC0.22□□□□□ -2.37
PCF11O94913 RNU6-505P-201ENST00000384427 107 ntBASIC0.22□□□□□ -2.37
PCF11O94913 SNORA16.2-201ENST00000390991 127 ntBASIC0.22□□□□□ -2.37
PCF11O94913 AC079382.1-201ENST00000493346 557 ntBASIC0.22□□□□□ -2.37
PCF11O94913 HMGB1P29-201ENST00000505659 499 ntBASIC0.22□□□□□ -2.37
PCF11O94913 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.22□□□□□ -2.37
PCF11O94913 RN7SKP12-201ENST00000516275 143 ntBASIC0.22□□□□□ -2.37
PCF11O94913 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.22□□□□□ -2.37
PCF11O94913 Z99289.3-201ENST00000605586 594 ntBASIC0.22□□□□□ -2.37
PCF11O94913 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
PCF11O94913 MTND4P5-201ENST00000435821 1374 ntBASIC0.22□□□□□ -2.37
PCF11O94913 SNORA24.1-201ENST00000384401 135 ntBASIC0.21□□□□□ -2.38
PCF11O94913 RPS29P13-201ENST00000402041 169 ntBASIC0.21□□□□□ -2.38
PCF11O94913 RN7SKP142-201ENST00000411236 328 ntBASIC0.21□□□□□ -2.38
PCF11O94913 EEF1A1P40-201ENST00000412883 573 ntBASIC0.21□□□□□ -2.38
PCF11O94913 AC012306.1-201ENST00000423267 114 ntBASIC0.21□□□□□ -2.38
PCF11O94913 RPS29P8-201ENST00000445109 171 ntBASIC0.21□□□□□ -2.38
PCF11O94913 AC074290.1-201ENST00000448883 135 ntBASIC0.21□□□□□ -2.38
PCF11O94913 AC079140.5-201ENST00000507882 310 ntBASIC0.21□□□□□ -2.38
PCF11O94913 AC010376.1-201ENST00000522101 334 ntBASIC0.21□□□□□ -2.38
PCF11O94913 SUB1P2-201ENST00000556401 297 ntBASIC0.21□□□□□ -2.38
PCF11O94913 AC004584.2-201ENST00000570407 410 ntBASIC0.21□□□□□ -2.38
PCF11O94913 SNORA2.2-201ENST00000365473 135 ntBASIC0.2□□□□□ -2.38
PCF11O94913 RNU1-119P-201ENST00000391122 165 ntBASIC0.2□□□□□ -2.38
PCF11O94913 AC013470.1-201ENST00000453438 462 ntBASIC0.2□□□□□ -2.38
PCF11O94913 LINC01399-202ENST00000458450 244 ntBASIC0.2□□□□□ -2.38
PCF11O94913 MTCO2P29-201ENST00000465212 189 ntBASIC0.2□□□□□ -2.38
PCF11O94913 RBBP4P6-201ENST00000508098 202 ntBASIC0.2□□□□□ -2.38
PCF11O94913 SNORA31.10-201ENST00000516482 106 ntBASIC0.2□□□□□ -2.38
PCF11O94913 AC106038.2-201ENST00000520706 568 ntBASIC0.2□□□□□ -2.38
PCF11O94913 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.2□□□□□ -2.38
PCF11O94913 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.2□□□□□ -2.38
PCF11O94913 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms