Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FGF7P1-201ENST00000582820 288 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 MIR5692C1-201ENST00000585309 91 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 HSPE1P19-201ENST00000603327 295 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 SNRPGP20-201ENST00000604477 205 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 AC007684.1-201ENST00000609671 477 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 AC103705.1-201ENST00000619013 241 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK1BO75841 AC027335.2-201ENST00000624030 375 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 AL078596.1-201ENST00000624856 447 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 U6.108-201ENST00000637764 58 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 ZNF204P-201ENST00000416749 2397 ntBASIC0.86□□□□□ -2.27
UPK1BO75841 MTND4P5-201ENST00000435821 1374 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 SNORA67.2-201ENST00000384300 149 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 RNU6-1031P-201ENST00000384773 107 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 MIR521-1-201ENST00000384902 87 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 MIR1289-2-201ENST00000408360 111 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK1BO75841 MTND2P9-201ENST00000422293 931 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 AC074290.1-201ENST00000448883 135 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 snoU13.26-201ENST00000459452 105 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 SRRM1P2-201ENST00000464531 1192 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 AC092436.3-201ENST00000511788 257 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 AC025647.1-201ENST00000517879 253 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 CYCSP23-201ENST00000519781 313 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 AC024995.1-201ENST00000523014 93 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 MTND1P35-201ENST00000526739 508 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK1BO75841 AL157687.1-201ENST00000554853 619 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK1BO75841 AC146944.4-201ENST00000602697 718 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 AC022217.4-201ENST00000604389 163 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 snoZ196.1-201ENST00000625269 89 ntBASIC0.85□□□□□ -2.27
UPK1BO75841 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.85□□□□□ -2.27
UPK1BO75841 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
UPK1BO75841 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
UPK1BO75841 RNU1-22P-201ENST00000363334 158 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 RNU4-66P-201ENST00000365199 138 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
UPK1BO75841 RNY3P9-201ENST00000384727 106 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
UPK1BO75841 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
UPK1BO75841 MRPS10P2-201ENST00000431226 381 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.84□□□□□ -2.27
UPK1BO75841 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.84□□□□□ -2.27
UPK1BO75841 RNA5SP401-201ENST00000515920 127 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 RNU1-142P-201ENST00000516682 145 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 Y_RNA.695-201ENST00000516715 107 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 AC145350.1-201ENST00000567426 208 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 MIR3945-201ENST00000581853 98 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.84□□□□□ -2.27
UPK1BO75841 AC073648.5-201ENST00000603502 305 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.84□□□□□ -2.27
UPK1BO75841 AC106754.2-201ENST00000623006 233 ntBASIC0.84□□□□□ -2.27
UPK1BO75841 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
UPK1BO75841 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.84□□□□□ -2.28
UPK1BO75841 RNU6-82P-201ENST00000363970 107 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 RNU4-20P-201ENST00000365601 151 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 RNU6-38P-201ENST00000384085 107 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 RNU6-1103P-201ENST00000384150 107 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 SNORA70.7-201ENST00000384159 133 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 AL049545.1-201ENST00000401856 572 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.83□□□□□ -2.28
UPK1BO75841 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.83□□□□□ -2.28
UPK1BO75841 AC092991.1-201ENST00000477176 376 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.83□□□□□ -2.28
UPK1BO75841 SNORA19.2-201ENST00000516013 114 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 SNORA40.12-201ENST00000516329 111 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 RNU1-92P-201ENST00000517017 135 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 RNU6-548P-201ENST00000517083 115 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 MIR5695-201ENST00000579717 85 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 AL158827.2-201ENST00000602494 330 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 AC025811.1-201ENST00000604312 472 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 AC087752.4-201ENST00000605911 462 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 AC137590.2-201ENST00000619709 240 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 AL691447.3-201ENST00000635020 330 ntBASIC0.83□□□□□ -2.28
UPK1BO75841 Y_RNA.1-201ENST00000352915 104 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RNU1-124P-201ENST00000363861 145 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 Y_RNA.296-201ENST00000364930 108 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RNU6-1240P-201ENST00000365155 104 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 SNORA75-201ENST00000384158 137 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RNU6-1186P-201ENST00000410429 97 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RNA5SP504-201ENST00000410676 117 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 AL359672.1-201ENST00000442302 409 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RPL39P38-201ENST00000467018 153 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RPS3AP17-201ENST00000472594 777 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RPL23AP75-201ENST00000491601 451 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 AC093852.1-201ENST00000503587 266 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RNU6-1332P-201ENST00000516666 104 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 Y_RNA.717-201ENST00000517106 92 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 RNA5SP454-201ENST00000517231 127 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 AL390123.1-201ENST00000603216 237 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.82□□□□□ -2.28
UPK1BO75841 MIR8054-201ENST00000620877 86 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 AC008873.1-201ENST00000625051 138 ntBASIC0.82□□□□□ -2.28
UPK1BO75841 U8.10-201ENST00000384260 133 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 240 ms