Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF40O75150 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF40O75150 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF40O75150 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF40O75150 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF40O75150 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF40O75150 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF40O75150 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RNF40O75150 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF40O75150 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF40O75150 RNA5SP322-201ENST00000363617 119 ntBASIC4.52□□□□□ -1.69
RNF40O75150 AL359837.1-201ENST00000381357 287 ntBASIC4.52□□□□□ -1.69
RNF40O75150 RNA5SP354-201ENST00000391247 136 ntBASIC4.52□□□□□ -1.69
RNF40O75150 AL445687.1-201ENST00000439946 251 ntBASIC4.52□□□□□ -1.69
RNF40O75150 RPS4XP11-201ENST00000446897 772 ntBASIC4.52□□□□□ -1.69
RNF40O75150 AC068339.1-201ENST00000526965 141 ntBASIC4.52□□□□□ -1.69
RNF40O75150 GNRHR2P1-201ENST00000555315 631 ntBASIC4.52□□□□□ -1.69
RNF40O75150 MIR92B-201ENST00000607575 96 ntBASIC4.52□□□□□ -1.69
RNF40O75150 AC073308.1-201ENST00000623696 305 ntBASIC4.52□□□□□ -1.69
RNF40O75150 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF40O75150 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF40O75150 USP8P1-201ENST00000494673 3183 ntBASIC4.51□□□□□ -1.69
RNF40O75150 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF40O75150 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RNF40O75150 RNU4-13P-201ENST00000364019 141 ntBASIC4.51□□□□□ -1.69
RNF40O75150 SNORD14D-201ENST00000384390 87 ntBASIC4.51□□□□□ -1.69
RNF40O75150 RNU1-89P-201ENST00000384592 164 ntBASIC4.51□□□□□ -1.69
RNF40O75150 AL117342.1-201ENST00000404861 406 ntBASIC4.51□□□□□ -1.69
RNF40O75150 RNU6-628P-201ENST00000410675 107 ntBASIC4.51□□□□□ -1.69
RNF40O75150 AC012671.1-201ENST00000451912 203 ntBASIC4.51□□□□□ -1.69
RNF40O75150 SNORA84-201ENST00000459229 133 ntBASIC4.51□□□□□ -1.69
RNF40O75150 AC011406.1-201ENST00000512440 370 ntBASIC4.51□□□□□ -1.69
RNF40O75150 Vault.1-201ENST00000516474 102 ntBASIC4.51□□□□□ -1.69
RNF40O75150 MIR2114-201ENST00000516645 80 ntBASIC4.51□□□□□ -1.69
RNF40O75150 RNA5SP468-201ENST00000516782 93 ntBASIC4.51□□□□□ -1.69
RNF40O75150 RNU6-1149P-201ENST00000516810 97 ntBASIC4.51□□□□□ -1.69
RNF40O75150 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF40O75150 AL590808.1-201ENST00000618696 141 ntBASIC4.51□□□□□ -1.69
RNF40O75150 AC006435.5-201ENST00000624486 112 ntBASIC4.51□□□□□ -1.69
RNF40O75150 AC140479.6-201ENST00000633535 357 ntBASIC4.51□□□□□ -1.69
RNF40O75150 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF40O75150 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF40O75150 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF40O75150 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RNF40O75150 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF40O75150 MIR302B-201ENST00000362188 73 ntBASIC4.5□□□□□ -1.69
RNF40O75150 RNU6-1279P-201ENST00000383917 103 ntBASIC4.5□□□□□ -1.69
RNF40O75150 RNU1-57P-201ENST00000384491 166 ntBASIC4.5□□□□□ -1.69
RNF40O75150 VDAC1P3-201ENST00000434069 851 ntBASIC4.5□□□□□ -1.69
RNF40O75150 RPL23AP52-201ENST00000439311 478 ntBASIC4.5□□□□□ -1.69
RNF40O75150 RBMY2UP-201ENST00000453474 324 ntBASIC4.5□□□□□ -1.69
RNF40O75150 AC084357.1-201ENST00000473404 255 ntBASIC4.5□□□□□ -1.69
RNF40O75150 AL592156.1-201ENST00000508758 304 ntBASIC4.5□□□□□ -1.69
RNF40O75150 AC107934.2-201ENST00000518653 310 ntBASIC4.5□□□□□ -1.69
RNF40O75150 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.5□□□□□ -1.69
RNF40O75150 IGKV3-31-201ENST00000523109 329 ntBASIC4.5□□□□□ -1.69
RNF40O75150 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF40O75150 HSPE1P7-201ENST00000604681 321 ntBASIC4.5□□□□□ -1.69
RNF40O75150 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF40O75150 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF40O75150 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF40O75150 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF40O75150 RNY4P6-201ENST00000363667 96 ntBASIC4.49□□□□□ -1.69
RNF40O75150 RNU6-1124P-201ENST00000384169 107 ntBASIC4.49□□□□□ -1.69
RNF40O75150 RNU6-975P-201ENST00000384296 105 ntBASIC4.49□□□□□ -1.69
RNF40O75150 MIR181A2-201ENST00000384863 110 ntBASIC4.49□□□□□ -1.69
RNF40O75150 SNORA11F-201ENST00000408237 128 ntBASIC4.49□□□□□ -1.69
RNF40O75150 AC107297.1-201ENST00000459991 176 ntBASIC4.49□□□□□ -1.69
RNF40O75150 RN7SL807P-201ENST00000470923 297 ntBASIC4.49□□□□□ -1.69
RNF40O75150 MRPS36P2-201ENST00000512569 299 ntBASIC4.49□□□□□ -1.69
RNF40O75150 RNU6-830P-201ENST00000516353 107 ntBASIC4.49□□□□□ -1.69
RNF40O75150 AC027419.1-201ENST00000522976 328 ntBASIC4.49□□□□□ -1.69
RNF40O75150 TVP23BP1-201ENST00000557500 617 ntBASIC4.49□□□□□ -1.69
RNF40O75150 AC034229.5-201ENST00000624258 185 ntBASIC4.49□□□□□ -1.69
RNF40O75150 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF40O75150 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF40O75150 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF40O75150 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.48□□□□□ -1.69
RNF40O75150 MIR372-201ENST00000362225 67 ntBASIC4.48□□□□□ -1.69
RNF40O75150 Y_RNA.93-201ENST00000363066 109 ntBASIC4.48□□□□□ -1.69
RNF40O75150 MIR3065-201ENST00000390137 79 ntBASIC4.48□□□□□ -1.69
RNF40O75150 MIR300-201ENST00000401138 83 ntBASIC4.48□□□□□ -1.69
RNF40O75150 SNORA3C-201ENST00000408792 125 ntBASIC4.48□□□□□ -1.69
RNF40O75150 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF40O75150 AC080013.2-201ENST00000460866 323 ntBASIC4.48□□□□□ -1.69
RNF40O75150 RNU6-504P-201ENST00000516568 104 ntBASIC4.48□□□□□ -1.69
RNF40O75150 MIR6891-201ENST00000618788 93 ntBASIC4.48□□□□□ -1.69
RNF40O75150 MIR8059-201ENST00000620427 81 ntBASIC4.48□□□□□ -1.69
RNF40O75150 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF40O75150 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF40O75150 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF40O75150 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF40O75150 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RNF40O75150 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF40O75150 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RNF40O75150 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF40O75150 RNU6-1134P-201ENST00000365156 101 ntBASIC4.47□□□□□ -1.69
RNF40O75150 MT-TI-201ENST00000387365 69 ntBASIC4.47□□□□□ -1.69
RNF40O75150 AL031121.1-201ENST00000406553 254 ntBASIC4.47□□□□□ -1.69
RNF40O75150 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms