Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 DEFA7P-201ENST00000382676 285 ntBASIC2.15□□□□□ -2.07
PRKNO60260 Y_RNA.389-201ENST00000383924 113 ntBASIC2.15□□□□□ -2.07
PRKNO60260 Y_RNA.424-201ENST00000384063 103 ntBASIC2.15□□□□□ -2.07
PRKNO60260 RNU6-708P-201ENST00000384217 107 ntBASIC2.15□□□□□ -2.07
PRKNO60260 RNU6-1274P-201ENST00000384557 107 ntBASIC2.15□□□□□ -2.07
PRKNO60260 RNU6-220P-201ENST00000390919 107 ntBASIC2.15□□□□□ -2.07
PRKNO60260 Y_RNA.597-201ENST00000410463 100 ntBASIC2.15□□□□□ -2.07
PRKNO60260 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.15□□□□□ -2.07
PRKNO60260 AC112492.4-201ENST00000456549 352 ntBASIC2.15□□□□□ -2.07
PRKNO60260 AC107032.1-201ENST00000485945 480 ntBASIC2.15□□□□□ -2.07
PRKNO60260 AC132942.1-201ENST00000486753 483 ntBASIC2.15□□□□□ -2.07
PRKNO60260 SNORA31.15-201ENST00000516771 132 ntBASIC2.15□□□□□ -2.07
PRKNO60260 AC091144.1-201ENST00000519573 138 ntBASIC2.15□□□□□ -2.07
PRKNO60260 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.15□□□□□ -2.07
PRKNO60260 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.15□□□□□ -2.07
PRKNO60260 AL356280.1-201ENST00000603614 379 ntBASIC2.15□□□□□ -2.07
PRKNO60260 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.15□□□□□ -2.07
PRKNO60260 AC064859.1-201ENST00000624741 174 ntBASIC2.15□□□□□ -2.07
PRKNO60260 FO624990.1-201ENST00000636373 85 ntBASIC2.15□□□□□ -2.07
PRKNO60260 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.15□□□□□ -2.07
PRKNO60260 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.15□□□□□ -2.07
PRKNO60260 MTND5P6-201ENST00000422338 1798 ntBASIC2.15□□□□□ -2.07
PRKNO60260 AC080100.1-201ENST00000624239 5356 ntBASIC2.15□□□□□ -2.07
PRKNO60260 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-873P-201ENST00000363833 107 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-944P-201ENST00000364023 107 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-879P-201ENST00000364328 108 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-1072P-201ENST00000384703 107 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-443P-201ENST00000384780 107 ntBASIC2.14□□□□□ -2.07
PRKNO60260 MIR10B-201ENST00000385011 110 ntBASIC2.14□□□□□ -2.07
PRKNO60260 MIR29B2-201ENST00000385055 81 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-159P-201ENST00000391080 106 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU1-139P-201ENST00000391307 165 ntBASIC2.14□□□□□ -2.07
PRKNO60260 AC007064.1-201ENST00000412238 351 ntBASIC2.14□□□□□ -2.07
PRKNO60260 Z98742.3-201ENST00000418637 326 ntBASIC2.14□□□□□ -2.07
PRKNO60260 CKS1BP2-201ENST00000497342 240 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-475P-201ENST00000516073 104 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNA5SP24-201ENST00000516478 95 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-1046P-201ENST00000516538 107 ntBASIC2.14□□□□□ -2.07
PRKNO60260 SNORA40.14-201ENST00000516543 86 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-1198P-201ENST00000516904 67 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNA5SP54-201ENST00000516951 92 ntBASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-586P-201ENST00000517265 104 ntBASIC2.14□□□□□ -2.07
PRKNO60260 AC090517.1-201ENST00000569307 266 ntBASIC2.14□□□□□ -2.07
PRKNO60260 AC008737.2-201ENST00000599446 118 ntBASIC2.14□□□□□ -2.07
PRKNO60260 AC136443.5-201ENST00000603741 370 ntBASIC2.14□□□□□ -2.07
PRKNO60260 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.14□□□□□ -2.07
PRKNO60260 AC005296.1-201ENST00000616145 209 ntBASIC2.14□□□□□ -2.07
PRKNO60260 AL449363.1-201ENST00000617815 186 ntBASIC2.14□□□□□ -2.07
PRKNO60260 AC010297.1-201ENST00000623948 149 ntBASIC2.14□□□□□ -2.07
PRKNO60260 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PRKNO60260 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.14□□□□□ -2.07
PRKNO60260 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PRKNO60260 RNU6-137P-201ENST00000363680 108 ntBASIC2.13□□□□□ -2.07
PRKNO60260 SNORD115-8-201ENST00000363856 82 ntBASIC2.13□□□□□ -2.07
PRKNO60260 SNORD115-38-201ENST00000365037 82 ntBASIC2.13□□□□□ -2.07
PRKNO60260 SNORD14.1-201ENST00000365609 90 ntBASIC2.13□□□□□ -2.07
PRKNO60260 SNORA51.11-201ENST00000384442 131 ntBASIC2.13□□□□□ -2.07
PRKNO60260 MIR1261-201ENST00000408659 82 ntBASIC2.13□□□□□ -2.07
PRKNO60260 RNA5SP181-201ENST00000410246 98 ntBASIC2.13□□□□□ -2.07
PRKNO60260 RNU6-101P-201ENST00000410323 104 ntBASIC2.13□□□□□ -2.07
PRKNO60260 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.13□□□□□ -2.07
PRKNO60260 EIF1P2-201ENST00000428233 350 ntBASIC2.13□□□□□ -2.07
PRKNO60260 AC027124.2-201ENST00000428249 105 ntBASIC2.13□□□□□ -2.07
PRKNO60260 MTCO3P8-201ENST00000453691 755 ntBASIC2.13□□□□□ -2.07
PRKNO60260 AC080013.2-201ENST00000460866 323 ntBASIC2.13□□□□□ -2.07
PRKNO60260 TRBV12-1-201ENST00000479785 344 ntBASIC2.13□□□□□ -2.07
PRKNO60260 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.13□□□□□ -2.07
PRKNO60260 RNU6-911P-201ENST00000516523 104 ntBASIC2.13□□□□□ -2.07
PRKNO60260 AC040926.1-201ENST00000530195 238 ntBASIC2.13□□□□□ -2.07
PRKNO60260 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.13□□□□□ -2.07
PRKNO60260 AC023824.2-201ENST00000566185 400 ntBASIC2.13□□□□□ -2.07
PRKNO60260 AC124312.5-201ENST00000604451 268 ntBASIC2.13□□□□□ -2.07
PRKNO60260 MIR5739-201ENST00000619803 80 ntBASIC2.13□□□□□ -2.07
PRKNO60260 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
PRKNO60260 RNA5SP361-201ENST00000362686 118 ntBASIC2.12□□□□□ -2.07
PRKNO60260 SNORA18.2-201ENST00000383865 132 ntBASIC2.12□□□□□ -2.07
PRKNO60260 Y_RNA.455-201ENST00000384230 98 ntBASIC2.12□□□□□ -2.07
PRKNO60260 RNA5SP213-201ENST00000391031 106 ntBASIC2.12□□□□□ -2.07
PRKNO60260 RNU6-823P-201ENST00000391042 103 ntBASIC2.12□□□□□ -2.07
PRKNO60260 RNU6-985P-201ENST00000410182 104 ntBASIC2.12□□□□□ -2.07
PRKNO60260 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.12□□□□□ -2.07
PRKNO60260 MTCO3P19-201ENST00000415864 321 ntBASIC2.12□□□□□ -2.07
PRKNO60260 AC096638.1-201ENST00000444678 216 ntBASIC2.12□□□□□ -2.07
PRKNO60260 MTND5P22-201ENST00000458380 195 ntBASIC2.12□□□□□ -2.07
PRKNO60260 AC007215.1-201ENST00000464893 276 ntBASIC2.12□□□□□ -2.07
PRKNO60260 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.12□□□□□ -2.07
PRKNO60260 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.12□□□□□ -2.07
PRKNO60260 MIR449C-201ENST00000516047 92 ntBASIC2.12□□□□□ -2.07
PRKNO60260 RNU6-764P-201ENST00000516396 105 ntBASIC2.12□□□□□ -2.07
PRKNO60260 SNORA25.14-201ENST00000516481 132 ntBASIC2.12□□□□□ -2.07
PRKNO60260 Y_RNA.720-201ENST00000517166 92 ntBASIC2.12□□□□□ -2.07
PRKNO60260 MIR2355-201ENST00000517199 87 ntBASIC2.12□□□□□ -2.07
PRKNO60260 RNU1-104P-201ENST00000517280 175 ntBASIC2.12□□□□□ -2.07
PRKNO60260 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.12□□□□□ -2.07
PRKNO60260 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.12□□□□□ -2.07
PRKNO60260 AC093023.1-201ENST00000547375 507 ntBASIC2.12□□□□□ -2.07
PRKNO60260 AL442163.3-201ENST00000554110 156 ntBASIC2.12□□□□□ -2.07
PRKNO60260 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
PRKNO60260 AC125232.2-201ENST00000592457 143 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms