Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC233702.2-202ENST00000562547 291 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 AC006111.3-201ENST00000622137 383 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 MIR3199-2-201ENST00000636243 86 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 AL109809.4-201ENST00000603520 2185 ntBASIC3.48□□□□□ -1.85
SRGAP3O43295 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.47□□□□□ -1.85
SRGAP3O43295 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRGAP3O43295 Y_RNA.217-201ENST00000364214 105 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 RNU4-56P-201ENST00000364700 142 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 Y_RNA.398-201ENST00000383952 99 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 RNU6-793P-201ENST00000384233 104 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 SNORA26.3-201ENST00000391119 136 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AL512633.1-201ENST00000399931 655 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 RNA5SP390-201ENST00000410191 113 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 RPS26P42-201ENST00000413485 326 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.47□□□□□ -1.85
SRGAP3O43295 AC105272.1-201ENST00000438604 198 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.47□□□□□ -1.85
SRGAP3O43295 Y_RNA.641-201ENST00000459414 105 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AP001486.1-201ENST00000463339 476 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AC003982.1-202ENST00000469928 248 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AL121594.1-201ENST00000475906 575 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.47□□□□□ -1.85
SRGAP3O43295 RNU6-155P-201ENST00000516347 100 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.47□□□□□ -1.85
SRGAP3O43295 MIR548AI-201ENST00000579940 88 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.47□□□□□ -1.85
SRGAP3O43295 AL713866.2-201ENST00000603579 219 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 MIR7106-201ENST00000612419 65 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AL110115.1-201ENST00000614396 364 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 AC091932.3-201ENST00000624223 323 ntBASIC3.47□□□□□ -1.85
SRGAP3O43295 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.47□□□□□ -1.85
SRGAP3O43295 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRGAP3O43295 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SRGAP3O43295 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRGAP3O43295 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRGAP3O43295 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRGAP3O43295 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRGAP3O43295 Y_RNA.101-201ENST00000363154 102 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 RNU6-704P-201ENST00000364162 103 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 RNU6-622P-201ENST00000384272 103 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 MIR208B-201ENST00000401172 77 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 OOSP1P1-201ENST00000423265 274 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 AC091179.3-201ENST00000474761 144 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 AL049873.1-201ENST00000480540 376 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.46□□□□□ -1.86
SRGAP3O43295 AC074133.1-201ENST00000515696 183 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.46□□□□□ -1.86
SRGAP3O43295 GTF3AP2-201ENST00000557014 266 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 HMGN2P15-201ENST00000585707 270 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 AC004467.1-201ENST00000615678 330 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.46□□□□□ -1.86
SRGAP3O43295 SNORD98-201ENST00000636377 67 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRGAP3O43295 AL365361.1-201ENST00000566942 3481 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 AC099654.7-201ENST00000635788 2127 ntBASIC3.46□□□□□ -1.86
SRGAP3O43295 AC009487.2-201ENST00000420969 6821 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRGAP3O43295 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
SRGAP3O43295 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRGAP3O43295 RNU1-112P-201ENST00000364401 164 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 SNORD113-1-201ENST00000365321 69 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 RNU6-211P-201ENST00000384047 107 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 RNA5SP344-201ENST00000411081 104 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 AL161651.1-201ENST00000440882 223 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 IFNA11P-201ENST00000446352 526 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.45□□□□□ -1.86
SRGAP3O43295 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 CYCSP23-201ENST00000519781 313 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRGAP3O43295 ZNF861P-201ENST00000588126 639 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 AL365265.1-201ENST00000621045 234 ntBASIC3.45□□□□□ -1.86
SRGAP3O43295 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SRGAP3O43295 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SRGAP3O43295 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SRGAP3O43295 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SRGAP3O43295 CUL1P1-201ENST00000509510 2425 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 AC004944.1-201ENST00000517807 3059 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SRGAP3O43295 RNU6-799P-201ENST00000363567 107 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 RNU6-487P-201ENST00000365430 104 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 U3.26-201ENST00000391236 204 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 SNORA48.8-201ENST00000391324 134 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 AL138827.1-201ENST00000402666 306 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 AL133475.1-201ENST00000404414 305 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 AL357139.1-201ENST00000407792 426 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 RNU6-394P-201ENST00000410735 107 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 BTF3P11-201ENST00000426582 477 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.44□□□□□ -1.86
SRGAP3O43295 RPS15AP5-201ENST00000436276 388 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.44□□□□□ -1.86
SRGAP3O43295 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.44□□□□□ -1.86
SRGAP3O43295 AC107626.1-201ENST00000471084 183 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 HMGB3P3-201ENST00000510526 400 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 RNU6-191P-201ENST00000516295 94 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 AC115990.1-201ENST00000526957 301 ntBASIC3.44□□□□□ -1.86
SRGAP3O43295 ELOCP29-201ENST00000588193 334 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms