Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.35□□□□□ -2.03
NPHP1O15259 AC009237.7-201ENST00000447357 229 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 MTND1P17-201ENST00000448961 204 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.35□□□□□ -2.03
NPHP1O15259 AC069439.1-201ENST00000494739 167 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.35□□□□□ -2.03
NPHP1O15259 RNU4-49P-201ENST00000516080 140 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 RNU1-40P-201ENST00000516816 164 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 RNU1-97P-201ENST00000516872 164 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.35□□□□□ -2.03
NPHP1O15259 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.35□□□□□ -2.03
NPHP1O15259 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.35□□□□□ -2.03
NPHP1O15259 MIR4448-201ENST00000584360 86 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 MIR5002-201ENST00000584713 97 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 BX322639.1-202ENST00000423987 2213 ntBASIC2.35□□□□□ -2.03
NPHP1O15259 CENPCP1-201ENST00000533085 2578 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 Y_RNA.86-201ENST00000363020 111 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 Y_RNA.132-201ENST00000363421 102 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 Y_RNA.505-201ENST00000384489 102 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.34□□□□□ -2.03
NPHP1O15259 MIR1283-1-201ENST00000408494 87 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 HMGN2P19-201ENST00000425149 265 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NPHP1O15259 AL357134.1-201ENST00000445848 426 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.34□□□□□ -2.03
NPHP1O15259 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.34□□□□□ -2.03
NPHP1O15259 AF235103.2-201ENST00000525753 346 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.34□□□□□ -2.03
NPHP1O15259 AC009248.2-201ENST00000619826 254 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 KPNA2P1-201ENST00000458289 1591 ntBASIC2.34□□□□□ -2.03
NPHP1O15259 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.34□□□□□ -2.03
NPHP1O15259 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NPHP1O15259 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.34□□□□□ -2.04
NPHP1O15259 MTND4P1-201ENST00000457501 1466 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 SNORD115-32-201ENST00000364079 82 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 RNA5SP100-201ENST00000410903 110 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 RNA5SP59-201ENST00000410922 110 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 MTCO3P46-201ENST00000425787 232 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 MTATP6P13-201ENST00000438531 667 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 RNA5SP57-201ENST00000459463 123 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 AL163540.1-201ENST00000485382 386 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.33□□□□□ -2.04
NPHP1O15259 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.33□□□□□ -2.04
NPHP1O15259 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.33□□□□□ -2.04
NPHP1O15259 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.33□□□□□ -2.04
NPHP1O15259 MIR4713-201ENST00000582691 75 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 SNRPGP20-201ENST00000604477 205 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.33□□□□□ -2.04
NPHP1O15259 MTND4P5-201ENST00000435821 1374 ntBASIC2.33□□□□□ -2.04
NPHP1O15259 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.33□□□□□ -2.04
NPHP1O15259 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP1O15259 MIR1287-201ENST00000408492 90 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP1O15259 BTF3P4-201ENST00000418852 495 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 NFU1P2-201ENST00000448700 469 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 FGF7P6-202ENST00000451282 293 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 RNU6-329P-201ENST00000459618 107 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 AC097473.1-201ENST00000508142 408 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP1O15259 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP1O15259 SNORA59B-202ENST00000578183 701 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 MIR5696-201ENST00000578474 85 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 AC060780.3-201ENST00000589464 80 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 AC122108.2-201ENST00000611946 526 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 AC005296.1-201ENST00000616145 209 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 AC091932.3-201ENST00000624223 323 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 AL359697.1-201ENST00000624879 587 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.32□□□□□ -2.04
NPHP1O15259 ZNF204P-201ENST00000416749 2397 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 SNORD115-8-201ENST00000363856 82 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 SNORD115-38-201ENST00000365037 82 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 MIR32-201ENST00000384965 70 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NPHP1O15259 AL356432.1-201ENST00000405809 419 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.31□□□□□ -2.04
NPHP1O15259 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.31□□□□□ -2.04
NPHP1O15259 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.31□□□□□ -2.04
NPHP1O15259 AC025033.1-201ENST00000463883 194 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 FO393415.2-201ENST00000480085 343 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.31□□□□□ -2.04
NPHP1O15259 AC067942.3-201ENST00000512025 362 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 RNU6-856P-201ENST00000516959 98 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 SUMO2P18-201ENST00000518873 252 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.31□□□□□ -2.04
NPHP1O15259 RRN3P3-201ENST00000549207 578 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 SUB1P4-201ENST00000566062 339 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 MIR4753-201ENST00000585119 83 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NPHP1O15259 AL159152.1-201ENST00000635019 2587 ntBASIC2.31□□□□□ -2.04
NPHP1O15259 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPHP1O15259 RNU6-596P-201ENST00000365395 98 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 RNU6-418P-201ENST00000384035 107 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 MIR9-3-201ENST00000385084 90 ntBASIC2.3□□□□□ -2.04
NPHP1O15259 RNU6-510P-201ENST00000391239 108 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms