Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 DEFB131C-201ENST00000528817 165 ntBASIC2.06□□□□□ -2.08
TO15178 AC093027.1-201ENST00000546698 429 ntBASIC2.06□□□□□ -2.08
TO15178 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.06□□□□□ -2.08
TO15178 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.06□□□□□ -2.08
TO15178 MIR4435-1-201ENST00000582552 80 ntBASIC2.06□□□□□ -2.08
TO15178 AC025754.2-201ENST00000606491 432 ntBASIC2.06□□□□□ -2.08
TO15178 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
TO15178 AC091932.3-201ENST00000624223 323 ntBASIC2.06□□□□□ -2.08
TO15178 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.06□□□□□ -2.08
TO15178 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TO15178 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
TO15178 ZNF702P-202ENST00000434269 1966 ntBASIC2.05□□□□□ -2.08
TO15178 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
TO15178 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
TO15178 RNU6-890P-201ENST00000384121 107 ntBASIC2.05□□□□□ -2.08
TO15178 SNORD14D-201ENST00000384390 87 ntBASIC2.05□□□□□ -2.08
TO15178 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
TO15178 MIR549A-201ENST00000385268 96 ntBASIC2.05□□□□□ -2.08
TO15178 RNU6-159P-201ENST00000391080 106 ntBASIC2.05□□□□□ -2.08
TO15178 MIR300-201ENST00000401138 83 ntBASIC2.05□□□□□ -2.08
TO15178 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
TO15178 MTND3P23-201ENST00000431980 347 ntBASIC2.05□□□□□ -2.08
TO15178 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.05□□□□□ -2.08
TO15178 AC022493.2-201ENST00000506122 481 ntBASIC2.05□□□□□ -2.08
TO15178 RNU6-470P-201ENST00000515954 104 ntBASIC2.05□□□□□ -2.08
TO15178 Y_RNA.675-201ENST00000516389 149 ntBASIC2.05□□□□□ -2.08
TO15178 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.05□□□□□ -2.08
TO15178 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
TO15178 SUB1P3-201ENST00000564581 315 ntBASIC2.05□□□□□ -2.08
TO15178 AC004584.2-201ENST00000570407 410 ntBASIC2.05□□□□□ -2.08
TO15178 MIR4795-201ENST00000584182 89 ntBASIC2.05□□□□□ -2.08
TO15178 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
TO15178 AL117336.2-201ENST00000602435 335 ntBASIC2.05□□□□□ -2.08
TO15178 AC005034.5-201ENST00000604219 466 ntBASIC2.05□□□□□ -2.08
TO15178 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.05□□□□□ -2.08
TO15178 AC126177.8-201ENST00000618339 1015 ntBASIC2.05□□□□□ -2.08
TO15178 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
TO15178 Y_RNA.106-201ENST00000363189 100 ntBASIC2.04□□□□□ -2.08
TO15178 Y_RNA.332-201ENST00000365271 113 ntBASIC2.04□□□□□ -2.08
TO15178 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
TO15178 AC123900.1-201ENST00000420390 96 ntBASIC2.04□□□□□ -2.08
TO15178 AC092423.1-201ENST00000430165 186 ntBASIC2.04□□□□□ -2.08
TO15178 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TO15178 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.04□□□□□ -2.08
TO15178 AP000870.1-201ENST00000472927 406 ntBASIC2.04□□□□□ -2.08
TO15178 SNORA25.14-201ENST00000516481 132 ntBASIC2.04□□□□□ -2.08
TO15178 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.04□□□□□ -2.08
TO15178 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.04□□□□□ -2.08
TO15178 MTND5P10-201ENST00000603719 1809 ntBASIC2.04□□□□□ -2.08
TO15178 AL359314.1-201ENST00000616913 261 ntBASIC2.04□□□□□ -2.08
TO15178 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
TO15178 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
TO15178 Y_RNA.58-201ENST00000362807 102 ntBASIC2.03□□□□□ -2.08
TO15178 Y_RNA.154-201ENST00000363624 102 ntBASIC2.03□□□□□ -2.08
TO15178 Y_RNA.187-201ENST00000363918 113 ntBASIC2.03□□□□□ -2.08
TO15178 RNU6-99P-201ENST00000364721 107 ntBASIC2.03□□□□□ -2.08
TO15178 RNY3P1-201ENST00000365085 102 ntBASIC2.03□□□□□ -2.08
TO15178 RNY3-201ENST00000365484 102 ntBASIC2.03□□□□□ -2.08
TO15178 Y_RNA.364-201ENST00000365532 101 ntBASIC2.03□□□□□ -2.08
TO15178 Y_RNA.577-201ENST00000384794 101 ntBASIC2.03□□□□□ -2.08
TO15178 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
TO15178 USP9YP16-201ENST00000430287 407 ntBASIC2.03□□□□□ -2.08
TO15178 AL353689.1-201ENST00000438895 199 ntBASIC2.03□□□□□ -2.08
TO15178 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.03□□□□□ -2.08
TO15178 USP9YP23-201ENST00000455085 407 ntBASIC2.03□□□□□ -2.08
TO15178 AC016925.1-201ENST00000458303 298 ntBASIC2.03□□□□□ -2.08
TO15178 MRPS17P9-201ENST00000511924 393 ntBASIC2.03□□□□□ -2.08
TO15178 AC008549.1-201ENST00000512900 643 ntBASIC2.03□□□□□ -2.08
TO15178 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.03□□□□□ -2.08
TO15178 RNU6-1114P-201ENST00000516022 107 ntBASIC2.03□□□□□ -2.08
TO15178 SCARNA16.3-201ENST00000516595 184 ntBASIC2.03□□□□□ -2.08
TO15178 RNU6-344P-201ENST00000516635 111 ntBASIC2.03□□□□□ -2.08
TO15178 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.03□□□□□ -2.08
TO15178 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.03□□□□□ -2.08
TO15178 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
TO15178 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.03□□□□□ -2.08
TO15178 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.03□□□□□ -2.08
TO15178 AC064859.1-201ENST00000624741 174 ntBASIC2.03□□□□□ -2.08
TO15178 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TO15178 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
TO15178 MTND5P16-201ENST00000460269 1703 ntBASIC2.03□□□□□ -2.09
TO15178 MTND4P1-201ENST00000457501 1466 ntBASIC2.02□□□□□ -2.09
TO15178 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TO15178 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TO15178 RNU1-62P-201ENST00000362599 164 ntBASIC2.02□□□□□ -2.09
TO15178 RNU4-79P-201ENST00000362764 141 ntBASIC2.02□□□□□ -2.09
TO15178 SNORD115-3-201ENST00000363100 82 ntBASIC2.02□□□□□ -2.09
TO15178 Y_RNA.132-201ENST00000363421 102 ntBASIC2.02□□□□□ -2.09
TO15178 RNU6-873P-201ENST00000363833 107 ntBASIC2.02□□□□□ -2.09
TO15178 RNU1-139P-201ENST00000391307 165 ntBASIC2.02□□□□□ -2.09
TO15178 RNA5SP508-201ENST00000411327 119 ntBASIC2.02□□□□□ -2.09
TO15178 UBE2V1P7-201ENST00000446395 340 ntBASIC2.02□□□□□ -2.09
TO15178 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
TO15178 RNU7-152P-201ENST00000458982 64 ntBASIC2.02□□□□□ -2.09
TO15178 RNU7-87P-201ENST00000459343 62 ntBASIC2.02□□□□□ -2.09
TO15178 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.02□□□□□ -2.09
TO15178 AC008413.1-201ENST00000511864 177 ntBASIC2.02□□□□□ -2.09
TO15178 RRN3P3-201ENST00000549207 578 ntBASIC2.02□□□□□ -2.09
TO15178 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.02□□□□□ -2.09
TO15178 UBL5P4-201ENST00000562584 236 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms