Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.52□□□□□ -2.49
CHD1O14646 SNORD14C-201ENST00000365382 88 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 MIR660-201ENST00000385235 97 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 AC007969.2-201ENST00000441891 191 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.53□□□□□ -2.49
CHD1O14646 RNU6-948P-201ENST00000516374 107 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 RNA5SP268-201ENST00000516828 124 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 RNU6-856P-201ENST00000516959 98 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 OR8K2P-201ENST00000524645 927 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.53□□□□□ -2.49
CHD1O14646 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.53□□□□□ -2.49
CHD1O14646 AC091135.1-201ENST00000585943 307 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 MTND3P19-201ENST00000603825 345 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 AC112204.3-201ENST00000623822 332 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 AL356596.1-201ENST00000624230 379 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 MTND5P42-201ENST00000637720 498 ntBASIC-0.53□□□□□ -2.49
CHD1O14646 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CHD1O14646 RNU2-59P-201ENST00000410482 191 ntBASIC-0.54□□□□□ -2.5
CHD1O14646 RNU6-735P-201ENST00000410612 107 ntBASIC-0.54□□□□□ -2.5
CHD1O14646 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.54□□□□□ -2.5
CHD1O14646 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.54□□□□□ -2.5
CHD1O14646 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.54□□□□□ -2.5
CHD1O14646 AC022893.3-201ENST00000607665 437 ntBASIC-0.54□□□□□ -2.5
CHD1O14646 MIR8076-201ENST00000611401 83 ntBASIC-0.54□□□□□ -2.5
CHD1O14646 U4.2-201ENST00000618561 85 ntBASIC-0.54□□□□□ -2.5
CHD1O14646 FTX_2.1-201ENST00000618816 94 ntBASIC-0.54□□□□□ -2.5
CHD1O14646 BX322639.1-202ENST00000423987 2213 ntBASIC-0.54□□□□□ -2.5
CHD1O14646 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.54□□□□□ -2.5
CHD1O14646 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 RNU6-994P-201ENST00000410507 111 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AL606517.2-201ENST00000442855 241 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 RBBP4P6-201ENST00000508098 202 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.55□□□□□ -2.5
CHD1O14646 DEFB108A-201ENST00000530110 222 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 MIR4293-201ENST00000584305 78 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.55□□□□□ -2.5
CHD1O14646 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 MIR15A-201ENST00000607334 83 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AL591926.4-201ENST00000616895 298 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 CDR1-202ENST00000625883 1485 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 RNU6-343P-201ENST00000364709 104 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AL079342.2-201ENST00000403367 482 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 RNA5SP201-201ENST00000410316 124 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AL354692.1-201ENST00000423044 315 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.55□□□□□ -2.5
CHD1O14646 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.55□□□□□ -2.5
CHD1O14646 SNORD4A-201ENST00000459174 72 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 RNU7-94P-201ENST00000459576 63 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.55□□□□□ -2.5
CHD1O14646 RNU6-583P-201ENST00000516012 92 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.55□□□□□ -2.5
CHD1O14646 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.55□□□□□ -2.5
CHD1O14646 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.56□□□□□ -2.5
CHD1O14646 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 RNU6-929P-201ENST00000384429 107 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 MTCYBP2-201ENST00000407745 171 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.56□□□□□ -2.5
CHD1O14646 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.56□□□□□ -2.5
CHD1O14646 AL133217.1-201ENST00000450980 425 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 AL139824.2-201ENST00000458731 1095 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 MTCO3P9-201ENST00000506989 781 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 AC004584.2-201ENST00000570407 410 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.56□□□□□ -2.5
CHD1O14646 AC234772.3-201ENST00000602277 528 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.56□□□□□ -2.5
CHD1O14646 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
CHD1O14646 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.56□□□□□ -2.5
CHD1O14646 AL450472.1-202ENST00000637286 180 ntBASIC-0.56□□□□□ -2.5
CHD1O14646 RNU6-545P-201ENST00000362681 104 ntBASIC-0.57□□□□□ -2.5
CHD1O14646 RNA5SP109-201ENST00000391010 116 ntBASIC-0.57□□□□□ -2.5
CHD1O14646 MTCYBP39-201ENST00000437562 491 ntBASIC-0.57□□□□□ -2.5
CHD1O14646 RNU7-56P-201ENST00000458744 62 ntBASIC-0.57□□□□□ -2.5
CHD1O14646 SNORA31.10-201ENST00000516482 106 ntBASIC-0.57□□□□□ -2.5
CHD1O14646 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.57□□□□□ -2.5
CHD1O14646 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.57□□□□□ -2.5
CHD1O14646 uc_338.16-201ENST00000621804 95 ntBASIC-0.57□□□□□ -2.5
CHD1O14646 MIR19A-201ENST00000384878 82 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 MIR1827-201ENST00000408549 66 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.58□□□□□ -2.5
CHD1O14646 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 AC007000.2-201ENST00000442564 487 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 SNORD126-201ENST00000459475 77 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.58□□□□□ -2.5
CHD1O14646 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.58□□□□□ -2.5
CHD1O14646 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.58□□□□□ -2.5
CHD1O14646 AC090517.1-201ENST00000569307 266 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 MIR3192-201ENST00000584920 77 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 AC012507.3-201ENST00000603556 477 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 AL022154.1-201ENST00000604698 785 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 SNORD98-201ENST00000636377 67 ntBASIC-0.58□□□□□ -2.5
CHD1O14646 RNA5SP517-201ENST00000364724 117 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms