Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AC005014.2-201ENST00000607795 599 ntBASIC2.04□□□□□ -2.08
AP3D1O14617 AC098657.3-201ENST00000620434 263 ntBASIC2.04□□□□□ -2.08
AP3D1O14617 MIR6852-201ENST00000621699 66 ntBASIC2.04□□□□□ -2.08
AP3D1O14617 AC099654.14-201ENST00000638599 341 ntBASIC2.04□□□□□ -2.08
AP3D1O14617 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
AP3D1O14617 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
AP3D1O14617 RNU6-1305P-201ENST00000364353 104 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.03□□□□□ -2.08
AP3D1O14617 AC138393.2-201ENST00000414742 246 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 AC060773.1-201ENST00000421698 310 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 AC016717.1-201ENST00000448918 286 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 YWHAEP4-201ENST00000505390 198 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 SNORA20.3-201ENST00000516880 132 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 UBL5P4-201ENST00000562584 236 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.03□□□□□ -2.08
AP3D1O14617 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 AC100812.1-201ENST00000607622 580 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 AC009229.3-201ENST00000608056 282 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 AL353149.1-201ENST00000610667 244 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 AC099654.5-201ENST00000636479 350 ntBASIC2.03□□□□□ -2.08
AP3D1O14617 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
AP3D1O14617 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
AP3D1O14617 Y_RNA.2-201ENST00000362330 96 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 Y_RNA.111-201ENST00000363248 100 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 RNU6-280P-201ENST00000364145 104 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 SNORD81.2-201ENST00000365153 76 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 MIR10B-201ENST00000385011 110 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
AP3D1O14617 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AL033519.2-201ENST00000403958 392 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 MTND3P23-201ENST00000431980 347 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AC099677.2-201ENST00000436385 175 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AC074290.1-201ENST00000448883 135 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 MTND3P10-201ENST00000450967 341 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 RNA5SP57-201ENST00000459463 123 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AP000870.1-201ENST00000472927 406 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AC008549.1-201ENST00000512900 643 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AP000889.1-201ENST00000530968 660 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.02□□□□□ -2.09
AP3D1O14617 AL355802.3-201ENST00000607571 545 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AL078596.1-201ENST00000624856 447 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 AC068205.3-201ENST00000636385 468 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 TPTEP1-208ENST00000636884 213 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 MTND5P6-201ENST00000422338 1798 ntBASIC2.02□□□□□ -2.09
AP3D1O14617 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 RNU4-82P-201ENST00000362443 140 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 RNU5F-3P-201ENST00000363767 117 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 Y_RNA.390-201ENST00000383932 102 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 MIR23A-201ENST00000385245 73 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 RNU1-139P-201ENST00000391307 165 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 AL117342.1-201ENST00000404861 406 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 RPL23AP7-203ENST00000449021 469 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.01□□□□□ -2.09
AP3D1O14617 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.01□□□□□ -2.09
AP3D1O14617 AC011406.1-201ENST00000512440 370 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 RNA5SP200-201ENST00000516360 103 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 Y_RNA.706-201ENST00000516933 99 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.01□□□□□ -2.09
AP3D1O14617 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.01□□□□□ -2.09
AP3D1O14617 MIR5094-201ENST00000578766 85 ntBASIC2.01□□□□□ -2.09
AP3D1O14617 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.01□□□□□ -2.09
AP3D1O14617 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
AP3D1O14617 MIR449A-201ENST00000362113 91 ntBASIC2□□□□□ -2.09
AP3D1O14617 Y_RNA.404-201ENST00000383978 102 ntBASIC2□□□□□ -2.09
AP3D1O14617 RNU4-53P-201ENST00000410828 140 ntBASIC2□□□□□ -2.09
AP3D1O14617 NCOR1P3-201ENST00000420479 303 ntBASIC2□□□□□ -2.09
AP3D1O14617 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2□□□□□ -2.09
AP3D1O14617 AL445305.1-201ENST00000432577 575 ntBASIC2□□□□□ -2.09
AP3D1O14617 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2□□□□□ -2.09
AP3D1O14617 NDUFB4P10-201ENST00000452541 359 ntBASIC2□□□□□ -2.09
AP3D1O14617 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2□□□□□ -2.09
AP3D1O14617 RNU7-57P-201ENST00000459540 60 ntBASIC2□□□□□ -2.09
AP3D1O14617 RPL7P42-201ENST00000481005 679 ntBASIC2□□□□□ -2.09
AP3D1O14617 AC010409.1-201ENST00000487382 476 ntBASIC2□□□□□ -2.09
AP3D1O14617 HMGN1P12-201ENST00000499125 195 ntBASIC2□□□□□ -2.09
AP3D1O14617 RNU6-1114P-201ENST00000516022 107 ntBASIC2□□□□□ -2.09
AP3D1O14617 RNU6-1041P-201ENST00000516254 102 ntBASIC2□□□□□ -2.09
AP3D1O14617 RNA5SP384-201ENST00000516615 116 ntBASIC2□□□□□ -2.09
AP3D1O14617 RNU1-117P-201ENST00000517041 158 ntBASIC2□□□□□ -2.09
AP3D1O14617 AC105029.1-201ENST00000520250 669 ntBASIC2□□□□□ -2.09
AP3D1O14617 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2□□□□□ -2.09
AP3D1O14617 AC013412.1-201ENST00000610687 192 ntBASIC2□□□□□ -2.09
AP3D1O14617 IGHVIII-44-202ENST00000636235 289 ntBASIC2□□□□□ -2.09
AP3D1O14617 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2□□□□□ -2.09
AP3D1O14617 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
AP3D1O14617 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
AP3D1O14617 RNU6-862P-201ENST00000362804 105 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 RNU6-793P-201ENST00000384233 104 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 RNA5SP213-201ENST00000391031 106 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.99□□□□□ -2.09
AP3D1O14617 AC098614.3-201ENST00000438957 440 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 AC091179.3-201ENST00000474761 144 ntBASIC1.99□□□□□ -2.09
AP3D1O14617 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.99□□□□□ -2.09
AP3D1O14617 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.99□□□□□ -2.09
AP3D1O14617 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.99□□□□□ -2.09
AP3D1O14617 AC093303.1-201ENST00000514549 295 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms