Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC087441.2-201ENST00000529141 262 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM38O00635 AC090616.3-201ENST00000582184 217 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 MIR3136-201ENST00000583498 78 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 MIR376A1-201ENST00000616574 68 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 AC007318.2-201ENST00000620999 243 ntBASIC2.89□□□□□ -1.95
TRIM38O00635 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM38O00635 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM38O00635 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TRIM38O00635 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM38O00635 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM38O00635 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM38O00635 MIR411-201ENST00000362239 96 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 Y_RNA.27-201ENST00000362540 103 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 Y_RNA.40-201ENST00000362645 93 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 Y_RNA.76-201ENST00000362931 109 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 SNORD81.1-201ENST00000363064 77 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 Y_RNA.170-201ENST00000363746 110 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 COX6CP10-201ENST00000416832 224 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 AC244670.1-201ENST00000436879 112 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 RN7SL499P-201ENST00000481141 276 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 AC087190.1-201ENST00000484462 480 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 AC107032.1-201ENST00000485945 480 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 RPS23P5-201ENST00000495419 428 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 SCARNA24.2-201ENST00000516968 130 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 AC109329.2-201ENST00000519658 482 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM38O00635 AC021753.1-201ENST00000635724 168 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 U6.92-201ENST00000636464 89 ntBASIC2.88□□□□□ -1.95
TRIM38O00635 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
TRIM38O00635 AL136360.1-201ENST00000503377 1900 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM38O00635 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM38O00635 AL355596.1-201ENST00000565399 3996 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 RNU1-72P-201ENST00000362976 153 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 Y_RNA.199-201ENST00000364014 102 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 MIR218-1-201ENST00000384999 110 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 RNU6-220P-201ENST00000390919 107 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 RNU6-700P-201ENST00000391043 107 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 RNA5SP184-201ENST00000411071 108 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 RNA5SP492-201ENST00000411330 114 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
TRIM38O00635 SNORA25.14-201ENST00000516481 132 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.87□□□□□ -1.95
TRIM38O00635 AC024405.2-202ENST00000532731 184 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 AP002392.1-201ENST00000537692 208 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 AP002770.2-201ENST00000543613 532 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 HSPE1P4-201ENST00000550617 308 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 AC023043.3-201ENST00000593113 385 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 MTND5P9-201ENST00000503854 1755 ntBASIC2.87□□□□□ -1.95
TRIM38O00635 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM38O00635 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.86□□□□□ -1.95
TRIM38O00635 AC062016.1-201ENST00000355719 319 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 SNORD50.1-201ENST00000362987 71 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 Y_RNA.143-201ENST00000363520 106 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 RNU6-142P-201ENST00000384019 107 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 RNU6-102P-201ENST00000384485 104 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 MIR521-1-201ENST00000384902 87 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRIM38O00635 Y_RNA.581-201ENST00000391017 97 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 RNU2-20P-201ENST00000410425 191 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM38O00635 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AL513124.1-201ENST00000450410 614 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM38O00635 AIG1P1-201ENST00000503376 148 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM38O00635 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM38O00635 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM38O00635 RNU6-346P-201ENST00000516288 111 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 RNU6-861P-201ENST00000516745 106 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM38O00635 AC079600.2-201ENST00000550076 130 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AC021231.3-201ENST00000558497 370 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 MIR3124-201ENST00000582636 67 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.86□□□□□ -1.95
TRIM38O00635 U2.14-201ENST00000615943 113 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AC009541.1-201ENST00000438279 2662 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AC096644.4-201ENST00000563417 2912 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM38O00635 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
TRIM38O00635 AC009487.2-201ENST00000420969 6821 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 LINC02555-201ENST00000563933 1951 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM38O00635 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TRIM38O00635 RPL21P75-201ENST00000396599 483 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 RPL21P28-201ENST00000401418 483 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM38O00635 AL590556.1-201ENST00000423231 483 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM38O00635 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM38O00635 AL109933.2-201ENST00000452651 260 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 RPL21P39-201ENST00000463605 483 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 AC132942.1-201ENST00000486753 483 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 AC093591.1-201ENST00000491435 481 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 RPL21P16-201ENST00000495531 483 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM38O00635 SERF1AP1-201ENST00000514575 187 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 AC022559.1-201ENST00000520905 205 ntBASIC2.85□□□□□ -1.95
TRIM38O00635 AC093023.1-201ENST00000547375 507 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms