Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
O00370 CENPCP1-201ENST00000533085 2578 ntBASIC2.02□□□□□ -2.09
O00370 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
O00370 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
O00370 SNORD32B-201ENST00000364460 84 ntBASIC2.01□□□□□ -2.09
O00370 RNU4-9P-201ENST00000364951 139 ntBASIC2.01□□□□□ -2.09
O00370 RNU6-26P-201ENST00000383985 107 ntBASIC2.01□□□□□ -2.09
O00370 RNU6-1026P-201ENST00000384465 108 ntBASIC2.01□□□□□ -2.09
O00370 NCOR1P3-201ENST00000420479 303 ntBASIC2.01□□□□□ -2.09
O00370 CBX3P6-201ENST00000430257 527 ntBASIC2.01□□□□□ -2.09
O00370 MTATP6P23-201ENST00000440153 476 ntBASIC2.01□□□□□ -2.09
O00370 AC003989.2-201ENST00000440224 169 ntBASIC2.01□□□□□ -2.09
O00370 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.01□□□□□ -2.09
O00370 RPL30P15-201ENST00000457129 321 ntBASIC2.01□□□□□ -2.09
O00370 SCARNA16.2-201ENST00000516520 172 ntBASIC2.01□□□□□ -2.09
O00370 RNA5SP384-201ENST00000516615 116 ntBASIC2.01□□□□□ -2.09
O00370 RNA5SP490-201ENST00000517141 136 ntBASIC2.01□□□□□ -2.09
O00370 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.01□□□□□ -2.09
O00370 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.01□□□□□ -2.09
O00370 AC016256.1-201ENST00000547971 354 ntBASIC2.01□□□□□ -2.09
O00370 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.01□□□□□ -2.09
O00370 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.01□□□□□ -2.09
O00370 AC010928.2-201ENST00000588017 287 ntBASIC2.01□□□□□ -2.09
O00370 AC016727.2-201ENST00000603988 621 ntBASIC2.01□□□□□ -2.09
O00370 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.01□□□□□ -2.09
O00370 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.01□□□□□ -2.09
O00370 AC005296.1-201ENST00000616145 209 ntBASIC2.01□□□□□ -2.09
O00370 SCARNA4-201ENST00000629045 128 ntBASIC2.01□□□□□ -2.09
O00370 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
O00370 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.01□□□□□ -2.09
O00370 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
O00370 ZNF299P-201ENST00000406845 1804 ntBASIC2.01□□□□□ -2.09
O00370 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2□□□□□ -2.09
O00370 RNU6-234P-201ENST00000365229 104 ntBASIC2□□□□□ -2.09
O00370 Y_RNA.404-201ENST00000383978 102 ntBASIC2□□□□□ -2.09
O00370 RNU6-541P-201ENST00000384709 110 ntBASIC2□□□□□ -2.09
O00370 RNU6-174P-201ENST00000410406 106 ntBASIC2□□□□□ -2.09
O00370 OR2AQ1P-201ENST00000451972 200 ntBASIC2□□□□□ -2.09
O00370 PRELID3BP1-201ENST00000457142 540 ntBASIC2□□□□□ -2.09
O00370 snoU13.23-201ENST00000458863 104 ntBASIC2□□□□□ -2.09
O00370 RPL30P10-201ENST00000488148 337 ntBASIC2□□□□□ -2.09
O00370 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2□□□□□ -2.09
O00370 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2□□□□□ -2.09
O00370 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2□□□□□ -2.09
O00370 FRG2DP-202ENST00000566967 323 ntBASIC2□□□□□ -2.09
O00370 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2□□□□□ -2.09
O00370 AL096840.1-201ENST00000603287 93 ntBASIC2□□□□□ -2.09
O00370 AC113139.1-201ENST00000605049 239 ntBASIC2□□□□□ -2.09
O00370 MTND4LP32-201ENST00000636111 270 ntBASIC2□□□□□ -2.09
O00370 ZNF204P-201ENST00000416749 2397 ntBASIC2□□□□□ -2.09
O00370 Y_RNA.259-201ENST00000364619 101 ntBASIC1.99□□□□□ -2.09
O00370 Y_RNA.384-201ENST00000383909 102 ntBASIC1.99□□□□□ -2.09
O00370 Y_RNA.529-201ENST00000384586 119 ntBASIC1.99□□□□□ -2.09
O00370 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.99□□□□□ -2.09
O00370 USMG5P1-201ENST00000425964 177 ntBASIC1.99□□□□□ -2.09
O00370 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.99□□□□□ -2.09
O00370 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.99□□□□□ -2.09
O00370 snoU13.30-201ENST00000458951 104 ntBASIC1.99□□□□□ -2.09
O00370 RNU7-14P-201ENST00000459331 62 ntBASIC1.99□□□□□ -2.09
O00370 RNU7-87P-201ENST00000459343 62 ntBASIC1.99□□□□□ -2.09
O00370 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.99□□□□□ -2.09
O00370 RNU6-1098P-201ENST00000516772 96 ntBASIC1.99□□□□□ -2.09
O00370 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.99□□□□□ -2.09
O00370 AL590705.4-201ENST00000532209 134 ntBASIC1.99□□□□□ -2.09
O00370 AC018630.3-201ENST00000542637 96 ntBASIC1.99□□□□□ -2.09
O00370 AC015712.3-201ENST00000559380 164 ntBASIC1.99□□□□□ -2.09
O00370 AC110588.1-201ENST00000559699 137 ntBASIC1.99□□□□□ -2.09
O00370 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.99□□□□□ -2.09
O00370 MIR5006-201ENST00000583027 110 ntBASIC1.99□□□□□ -2.09
O00370 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.99□□□□□ -2.09
O00370 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.99□□□□□ -2.09
O00370 AL773524.1-201ENST00000614065 229 ntBASIC1.99□□□□□ -2.09
O00370 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.99□□□□□ -2.09
O00370 AC112487.2-201ENST00000637950 304 ntBASIC1.99□□□□□ -2.09
O00370 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
O00370 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
O00370 Y_RNA.67-201ENST00000362870 100 ntBASIC1.98□□□□□ -2.09
O00370 RNU6-438P-201ENST00000365561 103 ntBASIC1.98□□□□□ -2.09
O00370 Y_RNA.405-201ENST00000383979 100 ntBASIC1.98□□□□□ -2.09
O00370 Y_RNA.451-201ENST00000384200 100 ntBASIC1.98□□□□□ -2.09
O00370 RNU6-1297P-201ENST00000384415 104 ntBASIC1.98□□□□□ -2.09
O00370 Y_RNA.524-201ENST00000384564 100 ntBASIC1.98□□□□□ -2.09
O00370 Y_RNA.561-201ENST00000384694 100 ntBASIC1.98□□□□□ -2.09
O00370 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
O00370 AL357139.1-201ENST00000407792 426 ntBASIC1.98□□□□□ -2.09
O00370 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
O00370 AC243428.1-201ENST00000421099 264 ntBASIC1.98□□□□□ -2.09
O00370 AC245102.2-201ENST00000448956 180 ntBASIC1.98□□□□□ -2.09
O00370 RNA5SP57-201ENST00000459463 123 ntBASIC1.98□□□□□ -2.09
O00370 RPS29P11-201ENST00000496507 171 ntBASIC1.98□□□□□ -2.09
O00370 AC108210.2-201ENST00000503681 201 ntBASIC1.98□□□□□ -2.09
O00370 AC093259.1-201ENST00000509755 300 ntBASIC1.98□□□□□ -2.09
O00370 ATP5EP1-201ENST00000510257 156 ntBASIC1.98□□□□□ -2.09
O00370 DEFB131C-201ENST00000528817 165 ntBASIC1.98□□□□□ -2.09
O00370 APOOP3-201ENST00000536787 586 ntBASIC1.98□□□□□ -2.09
O00370 AC093027.1-201ENST00000546698 429 ntBASIC1.98□□□□□ -2.09
O00370 AL355375.2-201ENST00000574825 175 ntBASIC1.98□□□□□ -2.09
O00370 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.98□□□□□ -2.09
O00370 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.98□□□□□ -2.09
O00370 AL132765.2-201ENST00000610812 351 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms