Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-438P-201ENST00000365561 103 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-1310P-201ENST00000384153 107 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.462-201ENST00000384268 102 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-102P-201ENST00000384485 104 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 SNORA26.7-201ENST00000391288 122 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-1132P-201ENST00000459214 107 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 AC091826.1-201ENST00000514065 313 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 RNA5SP385-201ENST00000515947 110 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 RNA5SP356-201ENST00000515972 94 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 NDUFB9P3-201ENST00000521269 501 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 AC055872.1-201ENST00000570978 278 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 UBL5P2-201ENST00000583788 219 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 AC091932.3-201ENST00000624223 323 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 MIR3674-201ENST00000636576 68 ntBASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC163A0A0D9SF12 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.16-201ENST00000362421 102 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.286-201ENST00000364813 102 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 RNA5SP125-201ENST00000364843 120 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.307-201ENST00000365022 117 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 SNORD63-201ENST00000384262 68 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.477-201ENST00000384352 108 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 RNU6-1203P-201ENST00000410703 110 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 RNA5SP229-201ENST00000410809 99 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 SNORD127-201ENST00000458892 86 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 RN7SL283P-201ENST00000489055 303 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 AK6P2-201ENST00000549020 471 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 MIR4753-201ENST00000585119 83 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 SNORD113-5-201ENST00000607261 78 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 MIR1248-201ENST00000629190 106 ntBASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC163A0A0D9SF12 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 AL391987.6-201ENST00000305671 199 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 RNU4-90P-201ENST00000362773 141 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.230-201ENST00000364348 109 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.541-201ENST00000384640 113 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 RPL23AP36-201ENST00000413895 458 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 RPL23AP3-201ENST00000453844 468 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 Y_RNA.668-201ENST00000516233 93 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 AC007536.1-201ENST00000533382 349 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 MIR3945-201ENST00000581853 98 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 MIR4506-201ENST00000584693 77 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC163A0A0D9SF12 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC163A0A0D9SF12 MIR449A-201ENST00000362113 91 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 SNORA38-201ENST00000363946 132 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.237-201ENST00000364439 102 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.570-201ENST00000384750 101 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 RNA5SP504-201ENST00000410676 117 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 EEF1B2P7-201ENST00000451177 676 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 RNU7-26P-201ENST00000458980 63 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 ATP5EP1-201ENST00000510257 156 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-496P-201ENST00000516145 99 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-155P-201ENST00000516347 100 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 AC022616.8-201ENST00000533569 253 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 AC008749.1-201ENST00000597650 306 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 AL109918.3-201ENST00000603072 338 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 AC025754.2-201ENST00000606491 432 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 IGHVIII-44-202ENST00000636235 289 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.15□□□□□ -1.91
CCDC163A0A0D9SF12 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.101-201ENST00000363154 102 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 MIR548B-201ENST00000385247 97 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.581-201ENST00000391017 97 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 EEF1A1P41-201ENST00000414667 207 ntBASIC3.14□□□□□ -1.91
CCDC163A0A0D9SF12 AL390729.2-201ENST00000416137 156 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms