Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AC016632.1-201ENST00000503994 196 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 AC074133.1-201ENST00000515696 183 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6-377P-201ENST00000515965 102 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6-123P-201ENST00000516163 102 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 SNORA25.12-201ENST00000516202 82 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 BNIP3P26-201ENST00000600827 554 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 AC108747.1-201ENST00000609508 535 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 AC090517.2-201ENST00000614966 680 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 AL359697.1-201ENST00000624879 587 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 AC006927.2-201ENST00000639256 389 ntBASIC-0.24□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6-424P-201ENST00000384367 105 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 RNA5SP496-201ENST00000391240 109 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 MIR1185-1-201ENST00000408598 86 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 AL663109.1-201ENST00000411498 844 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 AC016909.1-201ENST00000415916 166 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 MTND1P20-201ENST00000430341 950 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 MIR3678-201ENST00000578455 94 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 MIR5692A1-201ENST00000580523 69 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 MTATP6P2-201ENST00000603319 678 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 AC104408.1-201ENST00000605241 170 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 uc_338.34-201ENST00000617467 174 ntBASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.25□□□□□ -2.45
TRAV12-3A0A0B4J271 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AL445523.1-201ENST00000451184 1362 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6-336P-201ENST00000364891 107 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6-607P-201ENST00000411283 108 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 SNORD71-201ENST00000411292 86 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 RPS3AP3-201ENST00000411933 242 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AC106883.1-201ENST00000418805 562 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AC090960.1-201ENST00000421072 306 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 CALM2P4-201ENST00000430810 426 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 RPS25P9-201ENST00000435591 252 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 MTND4LP16-201ENST00000440828 295 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AC093850.1-201ENST00000454121 251 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 ELOCP24-201ENST00000456370 334 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 MTND3P25-201ENST00000509243 135 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AC116347.2-201ENST00000514912 523 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU7-128P-201ENST00000517247 62 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 MIR544B-201ENST00000582372 78 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AL158042.1-201ENST00000605338 460 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 SNORA28-201ENST00000606769 126 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AL139286.2-201ENST00000606838 396 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AP002360.4-201ENST00000606980 481 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AC091965.4-201ENST00000607691 587 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 PART1_2.1-201ENST00000612397 250 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AC122133.1-201ENST00000613964 233 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 AL136221.1-201ENST00000621449 509 ntBASIC-0.26□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU4-41P-201ENST00000364426 143 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 RNA5SP517-201ENST00000364724 117 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 U8.16-201ENST00000391279 133 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 CALM2P2-201ENST00000428512 440 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 AC004854.1-201ENST00000440356 349 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 AC010486.2-201ENST00000505572 483 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6-334P-201ENST00000517072 102 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 AC112693.2-201ENST00000556538 232 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 MIR4300-201ENST00000581016 96 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 MTND3P19-201ENST00000603825 345 ntBASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.27□□□□□ -2.45
TRAV12-3A0A0B4J271 AC073343.1-201ENST00000328239 651 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 SNORD114-5-201ENST00000362928 70 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6-302P-201ENST00000365249 107 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6V-201ENST00000384105 107 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 USP9YP21-201ENST00000420603 432 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 SNAP23P1-201ENST00000433229 246 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 AP000870.1-201ENST00000472927 406 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 AC008628.2-201ENST00000502605 298 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 AC104136.1-201ENST00000512969 394 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 MTCO3P27-201ENST00000514397 196 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU7-51P-201ENST00000516560 62 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 RNA5SP330-201ENST00000517096 96 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 AC141557.1-201ENST00000540982 400 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 AC005730.3-201ENST00000583067 366 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 AC073539.2-201ENST00000597113 165 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 7SK.7-201ENST00000603504 247 ntBASIC-0.28□□□□□ -2.45
TRAV12-3A0A0B4J271 MIR1-1-201ENST00000362147 71 ntBASIC-0.29□□□□□ -2.46
TRAV12-3A0A0B4J271 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 233.8 ms