Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 U8.9-201ENST00000365667 134 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 SNORA36A-201ENST00000384221 132 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 MIR196B-201ENST00000384852 84 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 MIR628-201ENST00000385229 95 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.581-201ENST00000391017 97 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 MIR190B-201ENST00000401119 79 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 FO393413.1-201ENST00000402892 195 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 AC012306.1-201ENST00000423267 114 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 AC096920.1-201ENST00000423991 241 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 Z82188.1-201ENST00000436709 154 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 AL138752.1-201ENST00000452964 351 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 AL121594.1-201ENST00000475906 575 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 SNORA31.16-201ENST00000516773 139 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.703-201ENST00000516846 111 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 AL442163.3-201ENST00000554110 156 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 BX284668.6-201ENST00000606899 438 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 AC243829.7-201ENST00000633081 225 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 U6.92-201ENST00000636464 89 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.65-201ENST00000362846 100 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 RNU6-1159P-201ENST00000362933 107 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.506-201ENST00000384494 102 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.541-201ENST00000384640 113 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 RPL21P75-201ENST00000396599 483 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 RPL21P28-201ENST00000401418 483 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 MIR1298-201ENST00000408783 112 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AL590556.1-201ENST00000423231 483 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 OOSP1P1-201ENST00000423265 274 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 MICF-203ENST00000432679 129 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 SNORD109B-201ENST00000458961 67 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 SNORD109A-201ENST00000459128 67 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 RNU7-120P-201ENST00000459334 63 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 RPL21P39-201ENST00000463605 483 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AC087190.1-201ENST00000484462 480 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AC107032.1-201ENST00000485945 480 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AC132942.1-201ENST00000486753 483 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AC093591.1-201ENST00000491435 481 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 RPL21P16-201ENST00000495531 483 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AP002770.2-201ENST00000543613 532 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 MIR3616-201ENST00000584070 92 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AL078605.1-201ENST00000603529 500 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AL034555.1-201ENST00000604816 211 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 MIR7157-201ENST00000635801 60 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 AC093831.2-201ENST00000624393 3427 ntBASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC187A0A096LP49 LINC02555-201ENST00000563933 1951 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 RNU6-682P-201ENST00000363843 106 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 SNORD56.5-201ENST00000364281 72 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.291-201ENST00000364886 113 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 RNU6-17P-201ENST00000384245 107 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 RNY3P4-201ENST00000384428 101 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 RNU6-18P-201ENST00000384527 107 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 MIR32-201ENST00000384965 70 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 MIR153-2-201ENST00000385225 87 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 RNU6-493P-201ENST00000391321 108 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 CBX3P9-201ENST00000402326 552 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 RNU6-1328P-201ENST00000410938 106 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 EIF4EP4-201ENST00000424916 578 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 AC092427.1-202ENST00000430569 476 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 EEF1B2P7-201ENST00000451177 676 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.644-201ENST00000459006 113 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 RN7SL499P-201ENST00000481141 276 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.674-201ENST00000516362 113 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 AC079600.2-201ENST00000550076 130 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 AC104984.5-201ENST00000586878 94 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 MIR376A1-201ENST00000616574 68 ntBASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC187A0A096LP49 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 RNU6-859P-201ENST00000362728 107 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.76-201ENST00000362931 109 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 RNA5SP508-201ENST00000411327 119 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 RPS26P42-201ENST00000413485 326 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 U8.22-201ENST00000459141 133 ntBASIC2.73□□□□□ -1.97
CCDC187A0A096LP49 TOMM22P6-201ENST00000465035 409 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms