Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNU6-123P-201ENST00000516163 102 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AL391840.1-201ENST00000571144 367 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 EIF1P4-201ENST00000572664 335 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AL162424.1-201ENST00000602325 221 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 BCRP9-201ENST00000605312 388 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AC091965.4-201ENST00000607691 587 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AC006001.4-201ENST00000622243 395 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 MIR103A2-201ENST00000362154 78 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-552P-201ENST00000362869 119 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 RNA5SP264-201ENST00000363115 107 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 U3.4-201ENST00000363352 213 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-716P-201ENST00000365621 103 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 RPS25P9-201ENST00000435591 252 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 MTCO2P7-201ENST00000446518 666 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-567P-201ENST00000516746 107 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 AC022784.5-201ENST00000522241 437 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 AC108747.1-201ENST00000609508 535 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 U6.108-201ENST00000637764 58 ntBASIC-0.14□□□□□ -2.43
HLA-DRB4X5D2U9 AL445523.1-201ENST00000451184 1362 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AC121333.1-201ENST00000567488 2709 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AP000568.1-201ENST00000282964 442 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 SNORD114-26-201ENST00000363543 72 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-371P-201ENST00000364283 108 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 SNORD32A-201ENST00000364805 84 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-224P-201ENST00000384055 107 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-975P-201ENST00000384296 105 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 MIR208B-201ENST00000401172 77 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 MIR1197-201ENST00000408818 88 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 CDK8P2-201ENST00000415020 547 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 MTND4P3-201ENST00000417829 541 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AC006366.1-201ENST00000422002 759 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 MTND1P32-201ENST00000433043 938 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-377P-201ENST00000515965 102 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-751P-201ENST00000516382 101 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 SNORD111.1-201ENST00000516421 86 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 LRRC6P1-201ENST00000532188 885 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AC022523.2-201ENST00000561045 150 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 MIR5692A1-201ENST00000580523 69 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 MIR544B-201ENST00000582372 78 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 MTATP6P2-201ENST00000603319 678 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 Z99497.2-201ENST00000603634 310 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 Z99289.3-201ENST00000605586 594 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AL359075.3-201ENST00000613288 217 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 AC005520.5-201ENST00000613926 164 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 SEPT14P17-201ENST00000617978 177 ntBASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.15□□□□□ -2.43
HLA-DRB4X5D2U9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 MIR549A-201ENST00000385268 96 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 RNU6-700P-201ENST00000391043 107 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 USP9YP21-201ENST00000420603 432 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AL133396.1-201ENST00000432048 687 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 STAG3L5P-204ENST00000443759 179 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 TPT1P7-201ENST00000458300 517 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AC079382.1-201ENST00000493346 557 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 MTND1P22-201ENST00000510572 951 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 RNU7-51P-201ENST00000516560 62 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 RNA5SP330-201ENST00000517096 96 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AC010620.1-201ENST00000601088 1102 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AL139286.2-201ENST00000606838 396 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AC131235.4-201ENST00000609288 620 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AC007014.2-201ENST00000615581 479 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AL359697.1-201ENST00000624879 587 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 AL390237.1-201ENST00000404226 1415 ntBASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
HLA-DRB4X5D2U9 SNORA42.1-201ENST00000363515 137 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 RNU6-560P-201ENST00000364007 108 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 RNY4P16-201ENST00000364768 94 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 AC016632.1-201ENST00000503994 196 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 MTCO3P27-201ENST00000514397 196 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 RNA5SP480-201ENST00000516840 109 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 AC009712.1-201ENST00000564938 316 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 AC004584.2-201ENST00000570407 410 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 AC064807.4-201ENST00000607201 407 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 RNU6-94P-201ENST00000607728 107 ntBASIC-0.17□□□□□ -2.44
HLA-DRB4X5D2U9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms