Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.09□□□□□ -2.23
COMMD3-BMI1R4GMX3 AL391987.6-201ENST00000305671 199 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNORA29-201ENST00000384183 140 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR320B2-201ENST00000408479 138 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR1283-1-201ENST00000408494 87 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 MTCYBP8-201ENST00000422855 651 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 HMGN2P9-201ENST00000476875 229 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC025465.4-201ENST00000513422 638 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 RN7SKP298-201ENST00000515950 94 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC008088.1-201ENST00000580993 280 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC104458.1-201ENST00000608243 463 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL354950.2-201ENST00000617939 290 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC005562.2-201ENST00000618264 111 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC009033.1-201ENST00000624279 431 ntBASIC1.08□□□□□ -2.24
COMMD3-BMI1R4GMX3 BX322639.1-202ENST00000423987 2213 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNORA36A-201ENST00000384221 132 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.481-201ENST00000384373 102 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-331P-201ENST00000384724 107 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 MIR513A1-201ENST00000385138 129 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNA5SP219-201ENST00000390940 113 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL117342.1-201ENST00000404861 406 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-321P-201ENST00000410912 106 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC004965.1-201ENST00000413033 213 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 MTCO2P19-201ENST00000427513 598 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 USP9YP29-201ENST00000445112 563 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 snoU13.27-201ENST00000459278 104 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-498P-201ENST00000459468 107 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 RPS29P27-201ENST00000463711 170 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 CENPUP1-201ENST00000526649 1202 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL512310.8-201ENST00000550183 120 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 SCOCP1-201ENST00000554676 349 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 FGF7P1-201ENST00000582820 288 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC004492.1-201ENST00000607036 742 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC017083.3-201ENST00000609955 700 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-1158P-201ENST00000391167 107 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 COX6CP10-201ENST00000416832 224 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 Z82205.1-201ENST00000428456 297 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-956P-201ENST00000458868 103 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-261P-201ENST00000459506 102 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC007215.1-201ENST00000464893 276 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 RPS3AP17-201ENST00000472594 777 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC011406.1-201ENST00000512440 370 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNORA40.12-201ENST00000516329 111 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL391646.1-201ENST00000603860 190 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 MZT1P2-201ENST00000604387 248 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNRPGP20-201ENST00000604477 205 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC012676.2-201ENST00000619258 186 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 MTND4P5-201ENST00000435821 1374 ntBASIC1.06□□□□□ -2.24
COMMD3-BMI1R4GMX3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.1-201ENST00000352915 104 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 Y_RNA.296-201ENST00000364930 108 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNORA18.2-201ENST00000383865 132 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-968P-201ENST00000384076 107 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 SNORA75-201ENST00000384158 137 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6-950P-201ENST00000384651 107 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC009237.7-201ENST00000447357 229 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 TPTE2P5-203ENST00000458118 728 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 CCDC34P1-201ENST00000507441 517 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 RN7SKP88-201ENST00000516847 250 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AC024995.1-201ENST00000523014 93 ntBASIC1.05□□□□□ -2.24
COMMD3-BMI1R4GMX3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms