Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 Z82209.1-201ENST00000422141 2135 ntBASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCH2Q9Y6C5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 U8.2-201ENST00000363156 134 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-461P-201ENST00000364195 107 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 Y_RNA.214-201ENST00000364201 112 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 SNORA18.2-201ENST00000383865 132 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 RNU2-63P-201ENST00000410792 194 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-130P-201ENST00000411112 103 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 ELOCP20-201ENST00000422460 345 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 AC004386.2-201ENST00000441858 148 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 UQCRBP2-201ENST00000447827 297 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 PCNPP5-201ENST00000452246 481 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 AC091179.3-201ENST00000474761 144 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 AC074133.1-201ENST00000515696 183 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-344P-201ENST00000516635 111 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 AC104027.1-201ENST00000521887 300 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 AC018630.3-201ENST00000542637 96 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTCH2Q9Y6C5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-859P-201ENST00000362728 107 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 Y_RNA.452-201ENST00000384202 108 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 MIR568-201ENST00000385036 95 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AL079342.1-201ENST00000401460 267 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 DYNLT3P2-201ENST00000442517 295 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 IFNA11P-201ENST00000446352 526 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 snoU13.15-201ENST00000459407 104 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 SNORA40.9-201ENST00000515895 93 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AC107016.2-201ENST00000547968 190 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AL356280.1-201ENST00000603614 379 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AL449363.1-201ENST00000617815 186 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 U4.1-201ENST00000620349 87 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AC007318.2-201ENST00000620999 243 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 U6.104-201ENST00000637979 90 ntBASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PTCH2Q9Y6C5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 Y_RNA.19-201ENST00000362462 99 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 RNU6-26P-201ENST00000383985 107 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 SNORA67.4-201ENST00000384688 142 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 AL161788.1-201ENST00000441805 169 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 IPO7P1-201ENST00000442031 636 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 AC025465.3-201ENST00000510570 311 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 RNU2-44P-201ENST00000516795 194 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 AC004817.2-201ENST00000561794 651 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 MIR3149-201ENST00000584629 83 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 MIR6817-201ENST00000615588 66 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 AC011476.5-201ENST00000615594 130 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 MIR376A1-201ENST00000616574 68 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 LINC02555-201ENST00000563933 1951 ntBASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTCH2Q9Y6C5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 RNA5SP68-201ENST00000363885 119 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 MIR627-201ENST00000384979 97 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 RPS23P5-201ENST00000495419 428 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 SNORA64.4-201ENST00000516632 81 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 DEFB131C-201ENST00000528817 165 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 AC233702.2-202ENST00000562547 291 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 AC023824.2-201ENST00000566185 400 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 MYL12BP1-201ENST00000569826 507 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 MIR4503-201ENST00000582187 83 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 MZT1P2-201ENST00000604387 248 ntBASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCH2Q9Y6C5 MIR8062-201ENST00000621515 85 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms