Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 AC007395.1-201ENST00000451333 677 ntBASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 GSTA11P-201ENST00000452866 669 ntBASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.683-201ENST00000516508 93 ntBASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 AC087588.2-201ENST00000617667 426 ntBASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.39-201ENST00000362620 98 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.112-201ENST00000363250 102 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 RNU6-879P-201ENST00000364328 108 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 SNORA67.1-201ENST00000364749 141 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 SNORD42.2-201ENST00000365570 69 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.395-201ENST00000383945 109 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR586-201ENST00000385035 97 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 RNU6-911P-201ENST00000516523 104 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 AC233702.2-202ENST00000562547 291 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 AC245884.12-201ENST00000615364 59 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 AC008873.1-201ENST00000625051 138 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 AC068205.3-201ENST00000636385 468 ntBASIC2.97□□□□□ -1.93
COL4A3BPQ9Y5P4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU4-42P-201ENST00000364738 142 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU6-160P-201ENST00000384591 107 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 RNA5SP213-201ENST00000391031 106 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 AL033519.2-201ENST00000403958 392 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR1262-201ENST00000408276 93 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 AC004866.1-201ENST00000411748 78 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU2-34P-201ENST00000516534 121 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 SNRPGP18-201ENST00000553000 214 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 AL359314.1-201ENST00000616913 261 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 AL078596.1-201ENST00000624856 447 ntBASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A3BPQ9Y5P4 ZNF271P-202ENST00000465539 1970 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU6-545P-201ENST00000362681 104 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 SNORA3A-201ENST00000364113 130 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 IFNA11P-201ENST00000446352 526 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 AC091179.3-201ENST00000474761 144 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 RPL23AP94-201ENST00000512518 302 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 AC096725.1-201ENST00000514266 313 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU1-117P-201ENST00000517041 158 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR4513-201ENST00000581077 86 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR4635-201ENST00000583759 79 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 AC022202.1-201ENST00000613515 211 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 U2.1-201ENST00000618978 145 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 AC130454.1-201ENST00000622948 401 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 AC091925.1-201ENST00000623204 462 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 AC131280.1-202ENST00000624067 4211 ntBASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL4A3BPQ9Y5P4 MTND5P35-201ENST00000557537 1720 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 MIR369-201ENST00000362155 70 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 Y_RNA.5-201ENST00000362334 102 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 RNA5SP393-201ENST00000363423 117 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 Y_RNA.445-201ENST00000384168 102 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 AC018865.2-201ENST00000423631 129 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU7-169P-201ENST00000459456 61 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 ELOCP31-201ENST00000540463 467 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 AC125232.2-201ENST00000592457 143 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 VN1R91P-201ENST00000594377 169 ntBASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL4A3BPQ9Y5P4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 SNORD115-3-201ENST00000363100 82 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU6-1001P-201ENST00000411265 100 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 MTCO3P19-201ENST00000415864 321 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 MTCO2P12-201ENST00000427426 682 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 AL137792.2-201ENST00000443484 235 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 RN7SKP49-201ENST00000516675 260 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 AC078899.2-201ENST00000595282 212 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 AC092447.9-201ENST00000603395 144 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 uc_338.22-201ENST00000622722 187 ntBASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL4A3BPQ9Y5P4 AC009487.4-201ENST00000624969 3585 ntBASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 RNU6-727P-201ENST00000363592 107 ntBASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 AC007677.1-201ENST00000445757 515 ntBASIC2.92□□□□□ -1.94
COL4A3BPQ9Y5P4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms