Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC027290.2-201ENST00000623210 18662 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AC002546.1-201ENST00000588041 2504 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AC010680.1-201ENST00000590024 3590 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 Y_RNA.495-201ENST00000384435 112 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 MIR548A1-201ENST00000385041 97 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 Y_RNA.617-201ENST00000410920 90 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 Z98742.2-201ENST00000431564 187 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 ABCF2P2-201ENST00000450549 296 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AC010531.2-201ENST00000465012 153 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 RPS27P22-201ENST00000478056 241 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 RN7SL812P-201ENST00000493791 279 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 RN7SKP19-201ENST00000516016 252 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 RNU6-537P-201ENST00000517277 103 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 RNU1-104P-201ENST00000517280 175 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AC006064.5-201ENST00000541782 248 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 TVP23BP1-201ENST00000557500 617 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 CYP4A43P-201ENST00000568156 121 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 MIR4662B-201ENST00000579498 81 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AC025166.1-201ENST00000612411 163 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AL138721.1-201ENST00000616756 179 ntBASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HRH3Q9Y5N1 AC103988.1-201ENST00000566382 2177 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 Y_RNA.203-201ENST00000364106 102 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 RNA5SP22-201ENST00000365393 109 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 AC091153.1-201ENST00000466297 402 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 RPS29P21-201ENST00000496272 170 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 MIR449C-201ENST00000516047 92 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 SNORD77.4-201ENST00000516158 81 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 RNU6-412P-201ENST00000516434 106 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 SNORA31.21-201ENST00000517180 77 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 RNU2-60P-201ENST00000517290 128 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 RN7SL703P-201ENST00000578485 302 ntBASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.87□□□□□ -1.79
HRH3Q9Y5N1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 RNU1-105P-201ENST00000363470 161 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 MIR767-201ENST00000390228 109 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 HMGN2P8-201ENST00000391458 268 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 AL117339.2-201ENST00000430475 180 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 SNORA84-201ENST00000459229 133 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 AC008155.2-201ENST00000464337 397 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 RNA5SP112-201ENST00000515937 99 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 AC015720.1-201ENST00000565251 277 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 AC103810.1-201ENST00000579873 453 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 MIR4765-201ENST00000585007 77 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 AC097639.2-201ENST00000603159 172 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 AC096577.2-201ENST00000611455 153 ntBASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HRH3Q9Y5N1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 RNA5SP130-201ENST00000364431 114 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 SNORD31B-201ENST00000364977 69 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 RNU6-234P-201ENST00000365229 104 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 RNA5SP38-201ENST00000410750 119 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 RNA5SP127-201ENST00000411051 133 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 AC006028.1-201ENST00000438379 402 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 AC016717.1-201ENST00000448918 286 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 PPIAP15-201ENST00000479662 484 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 RNA5SP73-201ENST00000516744 108 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 AC109329.2-201ENST00000519658 482 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 MIR5582-201ENST00000579697 68 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 AC006130.2-201ENST00000586202 326 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 AL929325.1-201ENST00000603096 117 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 MIR7151-201ENST00000617477 60 ntBASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms