Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RN7SL810P-201ENST00000493031 276 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 MRPS17P9-201ENST00000511924 393 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 RN7SKP21-201ENST00000516503 220 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 IGLVIV-65-201ENST00000517313 360 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 AC069240.1-201ENST00000548774 375 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 AC007224.1-201ENST00000564410 144 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 MIR3609-201ENST00000582661 80 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 MIR3117-201ENST00000584034 78 ntBASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PCDHB3Q9Y5E6 AC010889.1-201ENST00000566193 2666 ntBASIC4.34□□□□□ -1.72
PCDHB3Q9Y5E6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
PCDHB3Q9Y5E6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHB3Q9Y5E6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.34□□□□□ -1.72
PCDHB3Q9Y5E6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.34□□□□□ -1.72
PCDHB3Q9Y5E6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHB3Q9Y5E6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHB3Q9Y5E6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 SNORA31-201ENST00000362607 130 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 SNORA63D-201ENST00000364359 132 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 Y_RNA.244-201ENST00000364484 109 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 RNA5SP479-201ENST00000364858 117 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 MIR759-201ENST00000390224 91 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 SNORD77.3-201ENST00000391113 65 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 SNORA57.1-201ENST00000391227 145 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 RN7SKP27-201ENST00000410684 333 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 EIF4EP4-201ENST00000424916 578 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 NDUFA4P2-201ENST00000489989 244 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 SNORA31.9-201ENST00000516429 84 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 RNU6-521P-201ENST00000516663 105 ntBASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB3Q9Y5E6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 MIR448-201ENST00000362131 111 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 RNU1-22P-201ENST00000363334 158 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 SNORA70C-201ENST00000384538 135 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 RPS12P10-201ENST00000427031 377 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 AC069285.2-201ENST00000440210 275 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 RPL23AP93-201ENST00000440847 484 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 VWA8P1-201ENST00000510889 176 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 MIR449C-201ENST00000516047 92 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 RN7SKP289-201ENST00000517244 295 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 AL138721.1-201ENST00000616756 179 ntBASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PCDHB3Q9Y5E6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 RNA5SP502-201ENST00000362694 119 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 Y_RNA.265-201ENST00000364677 108 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 SNORD24-201ENST00000383884 75 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 MIR659-201ENST00000384963 97 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 RPS26P8-201ENST00000393490 348 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 RPS29P17-201ENST00000430795 166 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 MIR3160-1-201ENST00000577972 85 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 AL110115.1-201ENST00000614396 364 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 AC114781.5-201ENST00000615297 108 ntBASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB3Q9Y5E6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 RNU6-486P-201ENST00000363116 107 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 RNU1-63P-201ENST00000383902 164 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 RPL39P39-201ENST00000455840 151 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 RNA5SP310-201ENST00000459084 116 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 AC025445.1-201ENST00000502728 300 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 AC097462.1-201ENST00000514125 324 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 RNU2-58P-201ENST00000516403 183 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 RNA5SP309-201ENST00000516670 106 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 MIR1254-2-201ENST00000579553 63 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 MIR376A2-201ENST00000636782 80 ntBASIC4.3□□□□□ -1.72
PCDHB3Q9Y5E6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms