Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.18□□□□□ -1.9
TRAF6Q9Y4K3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.18□□□□□ -1.9
TRAF6Q9Y4K3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 Y_RNA.65-201ENST00000362846 100 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 Y_RNA.275-201ENST00000364726 110 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 RNA5SP229-201ENST00000410809 99 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 RNU2-14P-201ENST00000411053 191 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 MTCO1P5-201ENST00000433573 344 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 RNU6-138P-201ENST00000515952 107 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 SNORA27.4-201ENST00000516650 95 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 RNU2-12P-201ENST00000517216 168 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 MIR4444-1-201ENST00000581696 74 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 MIR4444-2-201ENST00000584390 74 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 AL162424.1-201ENST00000602325 221 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 U3.45-201ENST00000607547 219 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 AC012314.7-201ENST00000619693 93 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 MIR6075-201ENST00000620782 95 ntBASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAF6Q9Y4K3 Y_RNA.269-201ENST00000364685 89 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 SNORD87-201ENST00000364849 89 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 RNU6-1248P-201ENST00000391096 64 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 MIR300-201ENST00000401138 83 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 AL139156.1-201ENST00000412785 841 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 MRPS10P1-201ENST00000448483 130 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 RPL23AP3-201ENST00000453844 468 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 RN7SL601P-201ENST00000471221 293 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 SRIP1-201ENST00000489235 288 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 AC091959.1-201ENST00000495857 238 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 MIR4643-201ENST00000577473 78 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 MIR3199-1-201ENST00000582434 88 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 MIR5739-201ENST00000619803 80 ntBASIC3.16□□□□□ -1.9
TRAF6Q9Y4K3 AC080128.1-201ENST00000474389 1917 ntBASIC3.15□□□□□ -1.9
TRAF6Q9Y4K3 AL161912.2-201ENST00000565707 3007 ntBASIC3.15□□□□□ -1.9
TRAF6Q9Y4K3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.82-201ENST00000363000 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.92-201ENST00000363043 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.235-201ENST00000364412 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.306-201ENST00000365015 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.312-201ENST00000365089 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.322-201ENST00000365151 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 MIR218-2-201ENST00000385006 110 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.650-201ENST00000459002 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.777-201ENST00000516982 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 MIR3684-201ENST00000579779 74 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 MIR4282-201ENST00000583613 67 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 MIR3922-201ENST00000585192 84 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.771-201ENST00000598668 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.789-201ENST00000622480 102 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 AC093010.3-201ENST00000570269 15214 ntBASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAF6Q9Y4K3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 Y_RNA.200-201ENST00000364018 102 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 RNU6-944P-201ENST00000364023 107 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 RNU6-454P-201ENST00000364292 107 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 MIR218-1-201ENST00000384999 110 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 MIR95-201ENST00000385072 81 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 SNORA48.8-201ENST00000391324 134 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 CYP2C59P-201ENST00000457790 269 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 COX6CP14-201ENST00000469580 174 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 RNU6-966P-201ENST00000516479 104 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AC130289.1-201ENST00000577321 73 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AL512605.2-201ENST00000592972 256 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AL133393.1-201ENST00000603277 287 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AL049781.1-201ENST00000623195 3585 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 AC093831.2-201ENST00000624393 3427 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 MAPK10-266ENST00000641066 6555 ntBASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAF6Q9Y4K3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRAF6Q9Y4K3 AC135776.4-201ENST00000624300 1904 ntBASIC3.13□□□□□ -1.91
TRAF6Q9Y4K3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAF6Q9Y4K3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms