Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.16
RNF6Q9Y252 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RNF6Q9Y252 RNU6-562P-201ENST00000362731 107 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 RNU5B-2P-201ENST00000363036 113 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 RNU6-254P-201ENST00000363377 107 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 Y_RNA.226-201ENST00000364337 114 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
RNF6Q9Y252 Y_RNA.436-201ENST00000384097 102 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 RNU6-321P-201ENST00000410912 106 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 AP1B1P2-201ENST00000416196 106 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 MTCO3P46-201ENST00000425787 232 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 Z82205.1-201ENST00000428456 297 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF6Q9Y252 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF6Q9Y252 MTCO1P44-201ENST00000441935 243 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.53□□□□□ -2.16
RNF6Q9Y252 ATP5J2P3-201ENST00000451550 258 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 AL163540.1-201ENST00000485382 386 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF6Q9Y252 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF6Q9Y252 RNU6-1041P-201ENST00000516254 102 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 SNORA44.1-201ENST00000517031 108 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF6Q9Y252 FGF7P1-201ENST00000582820 288 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 MIR4753-201ENST00000585119 83 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 AC010900.2-201ENST00000604508 210 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 CTHRC1P1-201ENST00000605383 469 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 AF250324.2-201ENST00000608299 610 ntBASIC1.53□□□□□ -2.16
RNF6Q9Y252 MIR337-201ENST00000362281 93 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 Y_RNA.38-201ENST00000362617 102 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 Y_RNA.41-201ENST00000362646 102 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 RNU6-862P-201ENST00000362804 105 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 MIR30A-201ENST00000385092 71 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 RNU2-7P-201ENST00000410794 178 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 NDUFA5P4-201ENST00000436704 385 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.52□□□□□ -2.17
RNF6Q9Y252 RNU7-187P-201ENST00000458985 68 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 Y_RNA.665-201ENST00000516177 98 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 MTND1P35-201ENST00000526739 508 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.52□□□□□ -2.17
RNF6Q9Y252 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.52□□□□□ -2.17
RNF6Q9Y252 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.52□□□□□ -2.17
RNF6Q9Y252 SUB1P3-201ENST00000564581 315 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 AC099654.12-201ENST00000639868 649 ntBASIC1.52□□□□□ -2.17
RNF6Q9Y252 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RNF6Q9Y252 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF6Q9Y252 MIR424-201ENST00000362227 98 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 Y_RNA.151-201ENST00000363566 112 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 RNU6-1090P-201ENST00000364065 94 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 RNU4-24P-201ENST00000364565 139 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RNF6Q9Y252 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RNF6Q9Y252 MIR300-201ENST00000401138 83 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 MIR1283-1-201ENST00000408494 87 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 RNU6-908P-201ENST00000410160 94 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 AL353572.1-201ENST00000442490 417 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 AC087477.1-201ENST00000465747 340 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 AF186996.7-201ENST00000492781 209 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 HMGN1P13-201ENST00000505795 138 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 CBX3P4-201ENST00000538909 354 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 CPDP1-201ENST00000579660 283 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 AC012557.2-201ENST00000605919 418 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF6Q9Y252 TCL6_2.1-201ENST00000615162 119 ntBASIC1.51□□□□□ -2.17
RNF6Q9Y252 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF6Q9Y252 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RNF6Q9Y252 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.51□□□□□ -2.17
RNF6Q9Y252 MTND5P9-201ENST00000503854 1755 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 MIR126-201ENST00000362291 85 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 RNU6-112P-201ENST00000363599 104 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 SNORD113-7-201ENST00000363762 77 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 RNU6-128P-201ENST00000383976 107 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 RNU6-332P-201ENST00000391193 108 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 SNRPEP10-201ENST00000420249 274 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 MTCO1P20-201ENST00000425366 358 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 MTCO3P8-201ENST00000453691 755 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 PCMTD1P1-201ENST00000455560 355 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 snoU13.30-201ENST00000458951 104 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 AC005840.1-201ENST00000498412 377 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.5□□□□□ -2.17
RNF6Q9Y252 TRMT112P2-201ENST00000512910 132 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.5□□□□□ -2.17
RNF6Q9Y252 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.5□□□□□ -2.17
RNF6Q9Y252 RRN3P3-201ENST00000549207 578 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 DNAJC19P9-201ENST00000555084 351 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 AC026470.2-201ENST00000561492 181 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 MIR3198-2-201ENST00000577868 80 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.5□□□□□ -2.17
RNF6Q9Y252 AC016925.2-201ENST00000605108 242 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 AL359821.1-201ENST00000605519 182 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 AC080013.6-201ENST00000606185 215 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.5□□□□□ -2.17
RNF6Q9Y252 MIR1321-201ENST00000637766 79 ntBASIC1.5□□□□□ -2.17
RNF6Q9Y252 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
RNF6Q9Y252 RNU1-96P-201ENST00000364163 162 ntBASIC1.49□□□□□ -2.17
RNF6Q9Y252 RNU4-42P-201ENST00000364738 142 ntBASIC1.49□□□□□ -2.17
RNF6Q9Y252 MIR934-201ENST00000401241 83 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms