Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AC005828.6-201ENST00000606610 232 ntBASIC4.02□□□□□ -1.77
BRPF3Q9ULD4 SNORD11B-201ENST00000607707 90 ntBASIC4.02□□□□□ -1.77
BRPF3Q9ULD4 AC073349.3-201ENST00000617616 186 ntBASIC4.02□□□□□ -1.77
BRPF3Q9ULD4 UCA1.1-201ENST00000620952 75 ntBASIC4.02□□□□□ -1.77
BRPF3Q9ULD4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.02□□□□□ -1.77
BRPF3Q9ULD4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.02□□□□□ -1.77
BRPF3Q9ULD4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
BRPF3Q9ULD4 RNU6-545P-201ENST00000362681 104 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 Y_RNA.217-201ENST00000364214 105 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 SNORA62.3-201ENST00000365110 153 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 RNU6-47P-201ENST00000383866 107 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 RNU6-1264P-201ENST00000383891 107 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 Z98742.2-201ENST00000431564 187 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 Y_RNA.641-201ENST00000459414 105 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 AC006445.1-201ENST00000491925 405 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 RAC1P5-201ENST00000512182 576 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 RNU6-191P-201ENST00000516295 94 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 SNORA70.19-201ENST00000516717 90 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 AC087441.2-201ENST00000529141 262 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 AC008739.2-201ENST00000597006 317 ntBASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.01□□□□□ -1.77
BRPF3Q9ULD4 AL161431.1-201ENST00000618966 4205 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 SNORD21-201ENST00000383953 95 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 Y_RNA.464-201ENST00000384282 110 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 MIR218-2-201ENST00000385006 110 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 Y_RNA.597-201ENST00000410463 100 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 RNA5SP492-201ENST00000411330 114 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 AC009414.1-201ENST00000427200 443 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 CENPBD1P1-201ENST00000464061 469 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 HSPE1P18-201ENST00000517602 280 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 DEFB117-201ENST00000602356 141 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 AC034229.5-201ENST00000624258 185 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 AC068205.3-201ENST00000636385 468 ntBASIC4□□□□□ -1.77
BRPF3Q9ULD4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4□□□□□ -1.77
BRPF3Q9ULD4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4□□□□□ -1.77
BRPF3Q9ULD4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
BRPF3Q9ULD4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 RNU6-682P-201ENST00000363843 106 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 SNORD87-201ENST00000364849 89 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 AC097463.2-201ENST00000421074 142 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 RPL31P41-201ENST00000477967 372 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 RNU6-861P-201ENST00000516745 106 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 RNU2-44P-201ENST00000516795 194 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 RNU1-117P-201ENST00000517041 158 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 AC022559.1-201ENST00000520905 205 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 AC006380.1-201ENST00000603598 186 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 MIR7851-201ENST00000610611 160 ntBASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BRPF3Q9ULD4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 AL359854.1-201ENST00000614203 1594 ntBASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 AL513477.1-202ENST00000417061 214 ntBASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 AC008155.2-201ENST00000464337 397 ntBASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 RNU6-56P-201ENST00000516986 93 ntBASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 RNU2-12P-201ENST00000517216 168 ntBASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 MIR4444-1-201ENST00000581696 74 ntBASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 MIR4444-2-201ENST00000584390 74 ntBASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 AC072026.1-201ENST00000605023 201 ntBASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BRPF3Q9ULD4 AC000403.1-201ENST00000613696 3585 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 SNORA71.3-201ENST00000362582 128 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 RNU6-454P-201ENST00000364292 107 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 MIR200C-201ENST00000384980 68 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 SNORA12-201ENST00000391162 147 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 AL031121.1-201ENST00000406553 254 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 RN7SKP111-201ENST00000410349 271 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 RNA5SP504-201ENST00000410676 117 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 RN7SL293P-201ENST00000481765 281 ntBASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRPF3Q9ULD4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
BRPF3Q9ULD4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
BRPF3Q9ULD4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 Y_RNA.329-201ENST00000365209 107 ntBASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 EIF4EP4-201ENST00000424916 578 ntBASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 AC109925.1-201ENST00000478069 331 ntBASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 MIR4429-201ENST00000580105 73 ntBASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 AL670379.2-201ENST00000604983 252 ntBASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 snoU18.1-201ENST00000629629 71 ntBASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms