Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU6-57P-201ENST00000411348 103 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AC006461.1-201ENST00000412637 326 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AC126124.2-201ENST00000413542 321 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AC008134.1-201ENST00000420943 193 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 RPS29P7-201ENST00000439662 171 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AL137159.1-201ENST00000452808 512 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 RNU6-498P-201ENST00000459468 107 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 RN7SL271P-201ENST00000487601 295 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 ATP5EP1-201ENST00000510257 156 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 RNU2-34P-201ENST00000516534 121 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 MIR3646-201ENST00000578301 84 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AC005972.2-201ENST00000604690 348 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
FOXD3Q9UJU5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 RNU4-43P-201ENST00000410628 137 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 RNA5SP306-201ENST00000411087 107 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 RPL23AP58-201ENST00000440453 469 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 AL133547.1-201ENST00000448546 220 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 SNORA25.12-201ENST00000516202 82 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 CYCSP30-201ENST00000546447 172 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 AC025627.2-201ENST00000576220 160 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 MIR4444-1-201ENST00000581696 74 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 MIR4444-2-201ENST00000584390 74 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 AL354798.1-201ENST00000622505 329 ntBASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
FOXD3Q9UJU5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
FOXD3Q9UJU5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 AC100821.1-201ENST00000523153 2479 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 SNORD35B-201ENST00000363660 87 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 RNU6-407P-201ENST00000365280 104 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 SNORD14D-201ENST00000384390 87 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 SNORD116-13-201ENST00000384408 92 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 SNORA22C-201ENST00000384614 134 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 MIR449B-201ENST00000384995 97 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 MT-TT-201ENST00000387460 66 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 RNA5SP20-201ENST00000515976 84 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 AC112693.2-201ENST00000556538 232 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 MIR3944-201ENST00000581277 108 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 POLR3GP1-201ENST00000594073 261 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 AC020914.4-201ENST00000597690 277 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 MIR3658-201ENST00000636291 56 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 ZNF962P-201ENST00000443465 3140 ntBASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
FOXD3Q9UJU5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 FAM35DP-201ENST00000323387 2712 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 RNU6-1290P-201ENST00000362957 109 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 MIR670-201ENST00000390142 98 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AL138878.1-201ENST00000405131 347 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 SNORA57.3-201ENST00000411095 141 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AL135786.1-201ENST00000415892 214 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 RPS12P18-201ENST00000442381 270 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 SCARNA3-201ENST00000517097 143 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AC025647.1-201ENST00000517879 253 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AC090877.1-201ENST00000561418 344 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 LARP7P3-201ENST00000579888 337 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AC093732.2-201ENST00000607950 274 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AC107294.3-201ENST00000609211 526 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AC002064.3-201ENST00000623448 346 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AC012640.5-201ENST00000623897 319 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AL773545.4-201ENST00000637262 310 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 AL513478.4-201ENST00000641636 310 ntBASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXD3Q9UJU5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXD3Q9UJU5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms