Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 RNU6-496P-201ENST00000516145 99 ntBASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 AP001836.1-201ENST00000604675 523 ntBASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 AC097065.2-201ENST00000608159 533 ntBASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
VPS29Q9UBQ0 RNU6-440P-201ENST00000390882 105 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 SNORA16.2-201ENST00000390991 127 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 SNORD99-201ENST00000408612 74 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AL356583.2-201ENST00000426536 280 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 MTATP6P16-201ENST00000434543 526 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 NFU1P2-201ENST00000448700 469 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AC074290.1-201ENST00000448883 135 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AC233266.1-201ENST00000454518 96 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 SNORA70.12-201ENST00000516084 153 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 RNU6-1178P-201ENST00000516674 107 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AC103996.1-201ENST00000555468 102 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AC242852.1-201ENST00000612151 96 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AL359075.3-201ENST00000613288 217 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AC244015.1-201ENST00000622301 99 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 U6.108-201ENST00000637764 58 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 MTND4P5-201ENST00000435821 1374 ntBASIC0.3□□□□□ -2.36
VPS29Q9UBQ0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 RNU6-660P-201ENST00000364566 109 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 RNU6-550P-201ENST00000391057 101 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 MRPL42P3-201ENST00000401492 326 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 MTCO2P21-201ENST00000419780 677 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 EXOSC3P1-201ENST00000448649 500 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 SNRPGP9-201ENST00000456025 225 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 HSPE1P23-201ENST00000509838 286 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 MTND2P31-201ENST00000512602 616 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 AC026470.2-201ENST00000561492 181 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 MIR5006-201ENST00000583027 110 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 AC104010.1-201ENST00000616889 150 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 AL607023.1-201ENST00000620045 248 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 AC138649.3-201ENST00000622154 254 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 AC068787.1-201ENST00000623908 691 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 AL138960.2-201ENST00000625145 535 ntBASIC0.29□□□□□ -2.36
VPS29Q9UBQ0 RNU6-827P-201ENST00000365553 106 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 RNU4-48P-201ENST00000365559 182 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 RNU6-157P-201ENST00000383957 107 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 RNU6-57P-201ENST00000411348 103 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AC005002.2-201ENST00000438228 269 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AC004386.2-201ENST00000441858 148 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 USP9YP25-201ENST00000457708 443 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AC022364.2-201ENST00000457963 554 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AC025465.4-201ENST00000513422 638 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 RNU6-405P-201ENST00000516637 110 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 RNU6-467P-201ENST00000517027 110 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 MIR4711-201ENST00000578274 70 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AL078603.1-201ENST00000603824 313 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 AL139418.1-201ENST00000613613 177 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
VPS29Q9UBQ0 RNU6-636P-201ENST00000384598 107 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 RNU6-1242P-201ENST00000391052 103 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 MIR936-201ENST00000401264 98 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 Y_RNA.608-201ENST00000410647 95 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 CDK8P2-201ENST00000415020 547 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 AC016909.1-201ENST00000415916 166 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 snoU13.6-201ENST00000458785 104 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 RNU6-917P-201ENST00000516294 104 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 AC022616.3-201ENST00000523940 148 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 AC025627.3-201ENST00000582078 182 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 TCL6_2.1-201ENST00000615162 119 ntBASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS29Q9UBQ0 AP000568.1-201ENST00000282964 442 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 AL031313.1-201ENST00000448435 256 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 AC245047.8-201ENST00000456455 284 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 RN7SKP12-201ENST00000516275 143 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 SCARNA24.1-201ENST00000516465 137 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 SUB1P2-201ENST00000556401 297 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 AL162424.1-201ENST00000602325 221 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 AC069431.2-201ENST00000604149 1099 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 AL031667.3-201ENST00000620124 655 ntBASIC0.26□□□□□ -2.37
VPS29Q9UBQ0 U6.114-201ENST00000636407 96 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms