Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RPL26P6-201ENST00000440913 438 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 AL163973.1-201ENST00000484753 577 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 RNA5SP33-201ENST00000516687 98 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 AL392003.1-201ENST00000434394 243 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 MTCO3P9-201ENST00000506989 781 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 AL445584.3-201ENST00000617173 78 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 AL109620.1-201ENST00000618738 1197 ntBASIC-0.75□□□□□ -2.53
CHD7Q9P2D1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 SNORA24.1-201ENST00000384401 135 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AC244250.2-201ENST00000418731 148 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 RNA5SP272-201ENST00000516095 111 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 MIR3169-201ENST00000578032 83 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 FGF7P1-201ENST00000582820 288 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AC016542.1-201ENST00000608259 493 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AC007014.2-201ENST00000615581 479 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 RNU4-66P-201ENST00000365199 138 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 MIR653-201ENST00000385279 96 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AL158050.1-201ENST00000416077 457 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 RPL39P38-201ENST00000467018 153 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AC111193.1-201ENST00000504097 155 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 DEFB108D-201ENST00000527787 222 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 AP003072.5-201ENST00000623872 773 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 ZNF849P-201ENST00000594711 1566 ntBASIC-0.76□□□□□ -2.53
CHD7Q9P2D1 MTND4P9-201ENST00000507819 1346 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 SNORA72.1-201ENST00000363485 129 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AL451046.2-201ENST00000403074 277 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC068533.2-201ENST00000411872 306 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC027644.1-201ENST00000419595 298 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 DEFB130D-201ENST00000426866 237 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC024589.1-201ENST00000512207 263 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 MIR4300-201ENST00000581016 96 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 RNU6-87P-201ENST00000607561 108 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC105081.1-201ENST00000617727 106 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AL356596.1-201ENST00000624230 379 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 MTND5P31-201ENST00000419366 1374 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 RPL36P19-201ENST00000430744 301 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC010493.1-201ENST00000513479 292 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AL022067.1-201ENST00000602426 454 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 AC120349.3-201ENST00000624377 529 ntBASIC-0.77□□□□□ -2.53
CHD7Q9P2D1 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AL133264.1-201ENST00000407157 562 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 TXNL1P1-201ENST00000429528 554 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 STAG3L5P-204ENST00000443759 179 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AC021146.6-201ENST00000514659 117 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 RNU6-57P-201ENST00000411348 103 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 YWHAZP8-201ENST00000436935 731 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 snoU13.30-201ENST00000458951 104 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 MTCO3P27-201ENST00000514397 196 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 RNU6-118P-201ENST00000516552 102 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 MIR378D2-201ENST00000580636 98 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AC011458.1-201ENST00000604034 617 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AP000942.4-201ENST00000604811 241 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 SNORD83.1-201ENST00000411362 77 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 CALM2P2-201ENST00000428512 440 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 RNU7-34P-201ENST00000459394 64 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AC026616.1-201ENST00000523157 525 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AC004223.2-201ENST00000590309 544 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AC025588.3-201ENST00000604182 274 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 AL391903.3-201ENST00000612158 163 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 U6.48-201ENST00000618523 106 ntBASIC-0.78□□□□□ -2.53
CHD7Q9P2D1 RNU6-312P-201ENST00000364629 107 ntBASIC-0.79□□□□□ -2.54
CHD7Q9P2D1 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.79□□□□□ -2.54
CHD7Q9P2D1 USP9YP14-201ENST00000430663 563 ntBASIC-0.79□□□□□ -2.54
CHD7Q9P2D1 AL353997.1-201ENST00000432936 108 ntBASIC-0.79□□□□□ -2.54
CHD7Q9P2D1 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.79□□□□□ -2.54
CHD7Q9P2D1 RN7SKP256-201ENST00000517201 314 ntBASIC-0.79□□□□□ -2.54
CHD7Q9P2D1 AC006380.1-201ENST00000603598 186 ntBASIC-0.79□□□□□ -2.54
CHD7Q9P2D1 RNU6-944P-201ENST00000364023 107 ntBASIC-0.79□□□□□ -2.54
CHD7Q9P2D1 RNU4-56P-201ENST00000364700 142 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms