Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AC083906.5-201ENST00000503722 328 ntBASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 MIR7851-201ENST00000610611 160 ntBASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXXC1Q9P0U4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 RNA5SP374-201ENST00000362939 125 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 SNORD17-201ENST00000390930 237 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 RNU1-101P-201ENST00000391171 127 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 RNU6-381P-201ENST00000391259 108 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 RN7SL504P-201ENST00000494496 287 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 PHBP14-201ENST00000512887 367 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 AC021269.2-201ENST00000532318 330 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 CYP4A43P-201ENST00000568156 121 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 AC025754.2-201ENST00000606491 432 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 AP000553.6-201ENST00000641242 118 ntBASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CXXC1Q9P0U4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 AC091564.4-201ENST00000533934 2194 ntBASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 SNORA80A-201ENST00000363922 136 ntBASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 RNU6-275P-201ENST00000364910 107 ntBASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 Y_RNA.310-201ENST00000365063 113 ntBASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 SNORD113-1-201ENST00000365321 69 ntBASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 MIR591-201ENST00000385290 95 ntBASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 BMS1P22-201ENST00000414726 313 ntBASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXXC1Q9P0U4 AL365361.1-201ENST00000566942 3481 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 SNORD114-7-201ENST00000362520 77 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 RNU6-1205P-201ENST00000363625 106 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 RNU6-234P-201ENST00000365229 104 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 Y_RNA.343-201ENST00000365354 112 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 SEPT7P4-201ENST00000437076 306 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 HLA-N-201ENST00000437516 135 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 RNU7-57P-201ENST00000459540 60 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 MIR449C-201ENST00000516047 92 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 SNORA70.14-201ENST00000516205 110 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 RNU6-586P-201ENST00000517265 104 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 MIR4744-201ENST00000581563 82 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 MIR4672-201ENST00000583126 81 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 AC099778.2-201ENST00000610904 211 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.91□□□□□ -1.78
CXXC1Q9P0U4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CXXC1Q9P0U4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CXXC1Q9P0U4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CXXC1Q9P0U4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.9□□□□□ -1.78
CXXC1Q9P0U4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 RNU4-84P-201ENST00000364200 139 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 RNU6-1130P-201ENST00000365434 107 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 MIR626-201ENST00000385032 94 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 AL139095.1-201ENST00000404326 391 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 EBAG9P1-201ENST00000418955 543 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 AC025554.1-201ENST00000505641 188 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 RAC1P5-201ENST00000512182 576 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 AC090877.1-201ENST00000561418 344 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 MIR3945-201ENST00000581853 98 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 AC069294.1-201ENST00000608397 350 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 AC107294.3-201ENST00000609211 526 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 U4.6-201ENST00000621618 127 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 snoZ196.1-201ENST00000625269 89 ntBASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CXXC1Q9P0U4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms