Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR4524B-201ENST00000581569 115 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AC245884.10-201ENST00000597355 337 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AC087683.2-201ENST00000611384 326 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AL133216.2-202ENST00000634512 349 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
VAPAQ9P0L0 RNU6-606P-201ENST00000384721 111 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC004866.1-201ENST00000411748 78 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC013410.2-201ENST00000422627 201 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 RAB28P5-201ENST00000427490 651 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.76□□□□□ -2.29
VAPAQ9P0L0 CETN4P-201ENST00000432407 469 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC009237.7-201ENST00000447357 229 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC074290.1-201ENST00000448883 135 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.76□□□□□ -2.29
VAPAQ9P0L0 RNU7-57P-201ENST00000459540 60 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AL137161.1-201ENST00000532231 390 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AL391840.1-201ENST00000571144 367 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 MIR5583-1-201ENST00000580941 59 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 MIR4298-201ENST00000584380 73 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC146944.4-201ENST00000602697 718 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC022960.3-201ENST00000619794 441 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AF246928.1-201ENST00000623768 87 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC091895.1-201ENST00000624494 256 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 AC009161.2-201ENST00000624626 138 ntBASIC0.76□□□□□ -2.29
VAPAQ9P0L0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU4-79P-201ENST00000362764 141 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU6-227P-201ENST00000362865 103 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU6-181P-201ENST00000363225 107 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 Y_RNA.327-201ENST00000365201 102 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU6-297P-201ENST00000384636 107 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 MIR19B1-201ENST00000384829 87 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.75□□□□□ -2.29
VAPAQ9P0L0 CYCSP46-201ENST00000423569 204 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 AC133104.1-201ENST00000429100 218 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 MTND3P9-201ENST00000429526 346 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RPS4XP11-201ENST00000446897 772 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 SNORD124-201ENST00000459577 104 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 AC048334.1-201ENST00000477975 159 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 SNORA31.4-201ENST00000516049 129 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU1-142P-201ENST00000516682 145 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU6-759P-201ENST00000516740 103 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU6-922P-201ENST00000516753 99 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU6-445P-201ENST00000516949 107 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 RNU6-232P-201ENST00000517144 64 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.75□□□□□ -2.29
VAPAQ9P0L0 MIR5695-201ENST00000579717 85 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 BNIP3P39-201ENST00000601077 554 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 AC106754.2-201ENST00000623006 233 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 AC068787.1-201ENST00000623908 691 ntBASIC0.75□□□□□ -2.29
VAPAQ9P0L0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
VAPAQ9P0L0 RNU6-903P-201ENST00000391270 109 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 RN7SKP200-201ENST00000410564 320 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 Z82205.1-201ENST00000428456 297 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.74□□□□□ -2.29
VAPAQ9P0L0 AC010493.1-201ENST00000513479 292 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 RNA5SP168-201ENST00000516642 112 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 RN7SKP49-201ENST00000516675 260 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
VAPAQ9P0L0 AC008015.1-201ENST00000555505 465 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 AC104984.5-201ENST00000586878 94 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 AC022217.4-201ENST00000604389 163 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 MIR6857-201ENST00000613267 93 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 AC068792.1-201ENST00000621354 417 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.74□□□□□ -2.29
VAPAQ9P0L0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
VAPAQ9P0L0 AC018630.2-201ENST00000534866 2403 ntBASIC0.74□□□□□ -2.29
VAPAQ9P0L0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
VAPAQ9P0L0 RNU5B-2P-201ENST00000363036 113 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 RNU6-553P-201ENST00000364047 96 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 RNU6-1080P-201ENST00000383982 107 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 MIR586-201ENST00000385035 97 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 RNU6-482P-201ENST00000391068 107 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 AC063976.4-201ENST00000421971 163 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 AC005002.2-201ENST00000438228 269 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.73□□□□□ -2.29
VAPAQ9P0L0 RNU7-138P-201ENST00000459479 64 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 RNU6-1037P-201ENST00000459571 107 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 AC025465.4-201ENST00000513422 638 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 AC068790.2-201ENST00000602601 557 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 AC008536.2-201ENST00000607284 349 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 MIR8054-201ENST00000620877 86 ntBASIC0.73□□□□□ -2.29
VAPAQ9P0L0 Y_RNA.124-201ENST00000363339 93 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 SNORD114-24-201ENST00000365029 72 ntBASIC0.72□□□□□ -2.29
VAPAQ9P0L0 RNU6-505P-201ENST00000384427 107 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms