Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AP000560.1-201ENST00000624150 1937 ntBASIC2.62□□□□□ -1.99
NCKIPSDQ9NZQ3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-1141P-201ENST00000364520 107 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 Y_RNA.551-201ENST00000384661 102 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 MIR190B-201ENST00000401119 79 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 MTCO3P19-201ENST00000415864 321 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 AC007098.1-201ENST00000420122 367 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 CR769767.1-201ENST00000436337 346 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 MTCO3P8-201ENST00000453691 755 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RN7SKP210-201ENST00000459176 261 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 TOMM22P6-201ENST00000465035 409 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 CKS1BP2-201ENST00000497342 240 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RNY3P15-201ENST00000516297 97 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 AC040926.1-201ENST00000530195 238 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 HSPE1P4-201ENST00000550617 308 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 AC007375.1-201ENST00000554513 578 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 MIR5571-201ENST00000577998 113 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RPL30P11-203ENST00000598995 310 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 U2.1-201ENST00000618978 145 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 CTSLP2-204ENST00000629029 392 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-222P-201ENST00000362438 107 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 Y_RNA.210-201ENST00000364161 110 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU4-50P-201ENST00000364361 141 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU4-9P-201ENST00000364951 139 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-713P-201ENST00000384761 107 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-220P-201ENST00000390919 107 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 RN7SKP61-201ENST00000410642 295 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AC244670.1-201ENST00000436879 112 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AL353705.4-201ENST00000449661 238 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 RPS3P1-201ENST00000456781 192 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AC080013.2-201ENST00000460866 323 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 RNU6-1143P-201ENST00000516125 104 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AC104984.5-201ENST00000586878 94 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AL078605.1-201ENST00000603529 500 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AL356157.2-201ENST00000605122 111 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AC062037.2-201ENST00000610137 73 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AL159153.1-201ENST00000619688 317 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 AC243829.7-201ENST00000633081 225 ntBASIC2.6□□□□□ -1.99
NCKIPSDQ9NZQ3 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 U8.10-201ENST00000384260 133 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 SNORA26.3-201ENST00000391119 136 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 RPL21P1-201ENST00000399532 476 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 MTCYBP2-201ENST00000407745 171 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 CYCSP48-201ENST00000417124 323 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 snoU13.30-201ENST00000458951 104 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 AC087477.1-201ENST00000465747 340 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 AL121594.1-201ENST00000475906 575 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 AC104564.1-201ENST00000493028 407 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 SNORA31.16-201ENST00000516773 139 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 MIR8062-201ENST00000621515 85 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 AC090517.3-201ENST00000625170 141 ntBASIC2.59□□□□□ -1.99
NCKIPSDQ9NZQ3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.59□□□□□ -2
NCKIPSDQ9NZQ3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.59□□□□□ -2
NCKIPSDQ9NZQ3 RNU6-17P-201ENST00000384245 107 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 Y_RNA.489-201ENST00000384410 101 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 RNU6-18P-201ENST00000384527 107 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 SNORA69.1-201ENST00000390904 137 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 DYNLT3P2-201ENST00000442517 295 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 AC104389.3-201ENST00000445629 235 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 FCF1P4-201ENST00000448326 183 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 snoU13.6-201ENST00000458785 104 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 snoU13.14-201ENST00000459372 104 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 TRBV12-1-201ENST00000479785 344 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 AC016632.1-201ENST00000503994 196 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 RNU6-408P-201ENST00000515910 100 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 RNU7-175P-201ENST00000515915 61 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
NCKIPSDQ9NZQ3 RNA5SP148-201ENST00000516527 94 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms