Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RNU6-1175P-201ENST00000365200 107 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 RNU6-1026P-201ENST00000384465 108 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RLIMQ9NVW2 RN7SKP220-201ENST00000410611 288 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 RN7SKP123-201ENST00000410732 291 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 AL451074.5-201ENST00000415894 435 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.75□□□□□ -1.97
RLIMQ9NVW2 CBX3P6-201ENST00000430257 527 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 RNU7-14P-201ENST00000459331 62 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 RNA5SP385-201ENST00000515947 110 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 RNU6-344P-201ENST00000516635 111 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 RN7SKP282-201ENST00000516824 299 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.75□□□□□ -1.97
RLIMQ9NVW2 AC233702.2-202ENST00000562547 291 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 MIR5004-201ENST00000579078 107 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 MIR4506-201ENST00000584693 77 ntBASIC2.75□□□□□ -1.97
RLIMQ9NVW2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.75□□□□□ -1.97
RLIMQ9NVW2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.75□□□□□ -1.97
RLIMQ9NVW2 AC000403.1-201ENST00000613696 3585 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 MIR208A-201ENST00000362287 71 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.16-201ENST00000362421 102 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 SNORA70.4-201ENST00000365509 134 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 MIR34B-201ENST00000385076 84 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RNU6-220P-201ENST00000390919 107 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RNU6-1203P-201ENST00000410703 110 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RNU5A-5P-201ENST00000411054 116 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 ELOCP21-201ENST00000412558 336 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AL161788.1-201ENST00000441805 169 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RPL23AP3-201ENST00000453844 468 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 BX510359.1-201ENST00000456973 237 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RNU6-1132P-201ENST00000459214 107 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RPL7P49-201ENST00000471402 708 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RPS29P26-201ENST00000477483 171 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AC008885.1-201ENST00000514930 301 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AC074133.1-201ENST00000515696 183 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 RNA5SP76-201ENST00000516277 87 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 SCARNA24.2-201ENST00000516968 130 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 DEFB108E-201ENST00000524692 240 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AC090616.3-201ENST00000582184 217 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AC068205.3-201ENST00000636385 468 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RLIMQ9NVW2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
RLIMQ9NVW2 MTND5P6-201ENST00000422338 1798 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 AC135776.4-201ENST00000624300 1904 ntBASIC2.74□□□□□ -1.97
RLIMQ9NVW2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 RNA5SP387-201ENST00000364226 106 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.286-201ENST00000364813 102 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.477-201ENST00000384352 108 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.541-201ENST00000384640 113 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.570-201ENST00000384750 101 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 MIR181A2-201ENST00000384863 110 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AL590004.2-201ENST00000404787 371 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 RNA5SP475-201ENST00000410568 110 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 RNU2-63P-201ENST00000410792 194 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 CYP2C59P-201ENST00000457790 269 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC080013.2-201ENST00000460866 323 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 RN7SL807P-201ENST00000470923 297 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 RPS29P2-201ENST00000479278 136 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC023157.2-201ENST00000540596 141 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC055872.1-201ENST00000570978 278 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AL356280.1-201ENST00000603614 379 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 YPEL5P2-201ENST00000605553 359 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC090425.1-201ENST00000610007 140 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC006001.4-201ENST00000622243 395 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 AC091932.3-201ENST00000624223 323 ntBASIC2.73□□□□□ -1.97
RLIMQ9NVW2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RLIMQ9NVW2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.72□□□□□ -1.97
RLIMQ9NVW2 RNU6-545P-201ENST00000362681 104 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 RNU1-23P-201ENST00000363361 144 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.237-201ENST00000364439 102 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 RNU6-234P-201ENST00000365229 104 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.331-201ENST00000365267 102 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 SNORD63-201ENST00000384262 68 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.462-201ENST00000384268 102 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 Y_RNA.581-201ENST00000391017 97 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 RNU2-32P-201ENST00000411193 191 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.72□□□□□ -1.97
RLIMQ9NVW2 SNORD127-201ENST00000458892 86 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.72□□□□□ -1.97
RLIMQ9NVW2 RNU6-496P-201ENST00000516145 99 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.72□□□□□ -1.97
RLIMQ9NVW2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.72□□□□□ -1.97
RLIMQ9NVW2 AK6P2-201ENST00000549020 471 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 AL109918.3-201ENST00000603072 338 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 AL355297.2-201ENST00000604792 129 ntBASIC2.72□□□□□ -1.97
RLIMQ9NVW2 SNORD113-5-201ENST00000607261 78 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms