Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 AC016925.1-201ENST00000458303 298 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 AC117440.1-201ENST00000474107 571 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 AC010469.2-201ENST00000496412 480 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 RNA5SP341-201ENST00000516261 117 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 AC040926.1-201ENST00000530195 238 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 MIR4753-201ENST00000585119 83 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 RPS29P30-201ENST00000600975 111 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 AL353621.2-201ENST00000605340 133 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 AC090115.4-201ENST00000609970 188 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 AC107871.2-201ENST00000612894 502 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 AC068205.3-201ENST00000636385 468 ntBASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.4□□□□□ -2.03
LIN7CQ9NUP9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 RNU1-35P-201ENST00000362782 153 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 SNORD14.1-201ENST00000365609 90 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 SNORA54-201ENST00000384281 123 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 SNORA51.11-201ENST00000384442 131 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 MIR586-201ENST00000385035 97 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 AL590004.1-201ENST00000405321 300 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 SRIP3-201ENST00000413200 219 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 UQCRBP2-201ENST00000447827 297 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 HMGN2P9-201ENST00000476875 229 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 AC104695.3-201ENST00000604052 296 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 AC007742.2-201ENST00000618226 398 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 U6.92-201ENST00000636464 89 ntBASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
LIN7CQ9NUP9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.158-201ENST00000363651 101 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 RNU6-450P-201ENST00000364654 107 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC117470.1-201ENST00000381974 330 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 Y_RNA.389-201ENST00000383924 113 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 RNU6-639P-201ENST00000384074 107 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 RNU6-851P-201ENST00000384565 107 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 MIR181A2-201ENST00000384863 110 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 MIR483-201ENST00000385070 76 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 MIR181B1-201ENST00000385240 110 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 EDDM3CP-201ENST00000415977 425 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC022018.1-201ENST00000430685 241 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 RPL39P40-201ENST00000445481 146 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 PCNPP5-201ENST00000452246 481 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 RNU6-1137P-201ENST00000517073 99 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC026271.5-201ENST00000577873 130 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 MIR4680-201ENST00000580906 66 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 SNORD14A-201ENST00000606526 91 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC011476.5-201ENST00000615594 130 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AL162373.1-201ENST00000620433 407 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC091953.5-201ENST00000622919 233 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AL078596.1-201ENST00000624856 447 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC008873.1-201ENST00000625051 138 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 AC099654.10-201ENST00000640395 161 ntBASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.38□□□□□ -2.03
LIN7CQ9NUP9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 RNU1-52P-201ENST00000384190 164 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 RNU6-823P-201ENST00000391042 103 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 SNORD78.2-201ENST00000391076 69 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 SNORA48.5-201ENST00000391143 135 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 AL590004.2-201ENST00000404787 371 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 AC123900.1-201ENST00000420390 96 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 RPS29P6-201ENST00000438196 145 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 FCF1P4-201ENST00000448326 183 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 SNORA40.9-201ENST00000515895 93 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 SNORA74D-201ENST00000516404 141 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 RNU6-1012P-201ENST00000516606 109 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 RNU6-107P-201ENST00000516643 102 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 CYCSP23-201ENST00000519781 313 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 AK6P2-201ENST00000549020 471 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 MIR3605-201ENST00000583214 100 ntBASIC2.37□□□□□ -2.03
LIN7CQ9NUP9 AC022432.1-201ENST00000595739 310 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms