Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 CYCSP39-201ENST00000565821 309 ntBASIC4.03□□□□□ -1.76
ATG3Q9NT62 MIR3124-201ENST00000582636 67 ntBASIC4.03□□□□□ -1.76
ATG3Q9NT62 AC024153.1-201ENST00000603103 365 ntBASIC4.03□□□□□ -1.76
ATG3Q9NT62 MIR6076-201ENST00000617521 113 ntBASIC4.03□□□□□ -1.76
ATG3Q9NT62 SCARNA4-202ENST00000625402 129 ntBASIC4.03□□□□□ -1.76
ATG3Q9NT62 MIR3658-201ENST00000636291 56 ntBASIC4.03□□□□□ -1.76
ATG3Q9NT62 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG3Q9NT62 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG3Q9NT62 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG3Q9NT62 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 FTLP6-201ENST00000355274 422 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 MIR30E-201ENST00000362104 92 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 SNORA63.4-201ENST00000362763 126 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 RNU6-942P-201ENST00000363002 107 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 RNU4-11P-201ENST00000365287 132 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 SNORD15B-201ENST00000384714 146 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 RNU6-1211P-201ENST00000459179 105 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 PDCD5P2-201ENST00000507570 312 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 AC011602.1-201ENST00000546484 331 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 GTF3AP2-201ENST00000557014 266 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 MIR4474-201ENST00000579189 78 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 U6.98-201ENST00000637157 84 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 AC068700.1-201ENST00000565862 3754 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 AL355596.1-201ENST00000565399 3996 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG3Q9NT62 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG3Q9NT62 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 AC110491.1-201ENST00000562191 2010 ntBASIC4.02□□□□□ -1.77
ATG3Q9NT62 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG3Q9NT62 RNU6-275P-201ENST00000364910 107 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 RNU4-17P-201ENST00000365598 141 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 AP002088.1-201ENST00000382740 395 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 Y_RNA.542-201ENST00000384641 111 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 MIR325-201ENST00000385260 98 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 SNORD67-201ENST00000390833 111 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 SNORA48.8-201ENST00000391324 134 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 AL135938.1-201ENST00000443141 297 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG3Q9NT62 RN7SKP132-201ENST00000516001 208 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 AP002001.1-203ENST00000534002 267 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 DEFB117-201ENST00000602356 141 ntBASIC4.01□□□□□ -1.77
ATG3Q9NT62 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG3Q9NT62 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG3Q9NT62 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATG3Q9NT62 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
ATG3Q9NT62 SNORA36A-201ENST00000384221 132 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 MIR518D-201ENST00000385014 87 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4□□□□□ -1.77
ATG3Q9NT62 U3.37-201ENST00000408528 213 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 RNU2-68P-201ENST00000410878 191 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4□□□□□ -1.77
ATG3Q9NT62 RPL23AP95-201ENST00000426806 265 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 AC124916.1-201ENST00000444020 547 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4□□□□□ -1.77
ATG3Q9NT62 RPL30P14-201ENST00000482744 348 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4□□□□□ -1.77
ATG3Q9NT62 MIR3162-201ENST00000581818 82 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 XIST_intron.1-201ENST00000619444 68 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 U6.99-201ENST00000637524 83 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG3Q9NT62 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ATG3Q9NT62 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4□□□□□ -1.77
ATG3Q9NT62 AC000403.1-201ENST00000613696 3585 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG3Q9NT62 SRP72P2-201ENST00000344851 1979 ntBASIC4□□□□□ -1.77
ATG3Q9NT62 RNU6-137P-201ENST00000363680 108 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 RNU6-873P-201ENST00000363833 107 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 RNU6-381P-201ENST00000391259 108 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 HMGN2P20-201ENST00000437531 273 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 CST9LP2-201ENST00000437612 320 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 AP000705.1-201ENST00000454567 350 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG3Q9NT62 U8.19-201ENST00000459095 133 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 AC091179.1-201ENST00000461606 579 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.99□□□□□ -1.77
ATG3Q9NT62 YWHAEP4-201ENST00000505390 198 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 AC006445.2-201ENST00000510061 472 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 AC022616.8-201ENST00000533569 253 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG3Q9NT62 HSPE1P7-201ENST00000604681 321 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 AC073476.4-201ENST00000628409 72 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 MIR4679-1-201ENST00000637619 75 ntBASIC3.99□□□□□ -1.77
ATG3Q9NT62 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG3Q9NT62 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG3Q9NT62 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG3Q9NT62 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG3Q9NT62 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG3Q9NT62 AC004944.1-201ENST00000517807 3059 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 MIR22-201ENST00000362190 85 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 Y_RNA.43-201ENST00000362670 111 ntBASIC3.98□□□□□ -1.77
ATG3Q9NT62 SNORD115-8-201ENST00000363856 82 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms