Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 ACA59.1-201ENST00000515966 143 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 RNU6-864P-201ENST00000516256 108 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 MIR5094-201ENST00000578766 85 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 MIR3942-201ENST00000585264 109 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 MIR3662-201ENST00000637030 95 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 AC100810.6-201ENST00000638068 285 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 BX322639.1-202ENST00000423987 2213 ntBASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCL28Q9NRJ3 Y_RNA.6-201ENST00000362350 114 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 SNORD115-32-201ENST00000364079 82 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 Y_RNA.453-201ENST00000384223 109 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 MIR320B2-201ENST00000408479 138 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 HMGB1P18-201ENST00000438801 619 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 NFU1P2-201ENST00000448700 469 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 AC114982.1-201ENST00000469402 321 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 AC023790.1-201ENST00000482174 347 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 SNORA31.17-201ENST00000516953 127 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 RNU6-250P-201ENST00000516958 103 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 AC069114.2-201ENST00000604699 304 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 AC124303.1-201ENST00000605703 360 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 AC019193.3-201ENST00000609144 554 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 uc_338.5-201ENST00000611839 155 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.31□□□□□ -2.2
CCL28Q9NRJ3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 RNU6-661P-201ENST00000362409 107 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 SNORD115-8-201ENST00000363856 82 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 SNORD115-38-201ENST00000365037 82 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 RNU6-418P-201ENST00000384035 107 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 MIR487A-201ENST00000385009 80 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 MIR548F1-201ENST00000408667 84 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 RNU6-1148P-201ENST00000410992 104 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 AC099677.2-201ENST00000436385 175 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 HSPE1P21-201ENST00000438283 308 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 AC112492.4-201ENST00000456549 352 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 HMGN2P9-201ENST00000476875 229 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 RNA5SP54-201ENST00000516951 92 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 RRN3P3-201ENST00000549207 578 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 MIR3198-2-201ENST00000577868 80 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 MIR502-201ENST00000606349 86 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 AL353149.1-201ENST00000610667 244 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 AC006026.1-201ENST00000444025 1803 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 AC245060.5-201ENST00000610778 3293 ntBASIC1.3□□□□□ -2.2
CCL28Q9NRJ3 ZNF204P-201ENST00000416749 2397 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 SNORD114-1-201ENST00000362705 72 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RNU6-1013P-201ENST00000384180 107 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RNU6-975P-201ENST00000384296 105 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RNU6-831P-201ENST00000384548 107 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RNU6-306P-201ENST00000384617 107 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 MIR586-201ENST00000385035 97 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RPL21P111-201ENST00000418453 477 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 Z82188.1-201ENST00000436709 154 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 MTND4LP16-201ENST00000440828 295 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RNU6-498P-201ENST00000459468 107 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 TRBV12-1-201ENST00000479785 344 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 HMGB3P17-201ENST00000504195 649 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 AC008834.1-201ENST00000511612 175 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RNU6-273P-201ENST00000516937 96 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 SNORA44.1-201ENST00000517031 108 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 CBX3P4-201ENST00000538909 354 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 SNORA59B-202ENST00000578183 701 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 AP003465.2-201ENST00000602571 373 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 AC006504.8-201ENST00000621046 635 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 AC008873.1-201ENST00000625051 138 ntBASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCL28Q9NRJ3 RNU6-862P-201ENST00000362804 105 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 RNU6-245P-201ENST00000384020 107 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 RNU6-439P-201ENST00000384188 106 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 RNU6-296P-201ENST00000384608 107 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 MIR32-201ENST00000384965 70 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 MIR30A-201ENST00000385092 71 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 MIR1304-201ENST00000408243 91 ntBASIC1.28□□□□□ -2.2
CCL28Q9NRJ3 MIR1277-201ENST00000408536 78 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms