Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU6-1198P-201ENST00000516904 67 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 SNRPGP19-201ENST00000603826 189 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AC100812.1-201ENST00000607622 580 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AC090971.5-201ENST00000621102 293 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 Y_RNA.48-201ENST00000362710 103 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 SNORA6-201ENST00000384033 151 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 Y_RNA.577-201ENST00000384794 101 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 MIR153-2-201ENST00000385225 87 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 RNA5SP201-201ENST00000410316 124 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AL353997.1-201ENST00000432936 108 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AC099799.1-201ENST00000439809 192 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AL353752.1-201ENST00000454946 260 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 RNU6-586P-201ENST00000517265 104 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AL138963.2-201ENST00000605137 226 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AC090517.3-201ENST00000625170 141 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 Z82195.2-201ENST00000612348 18351 ntBASIC2.42□□□□□ -2.02
DDX4Q9NQI0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
DDX4Q9NQI0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DDX4Q9NQI0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DDX4Q9NQI0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
DDX4Q9NQI0 snoU2_19.1-201ENST00000362361 80 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 RNU4-15P-201ENST00000362613 141 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 RNU6-137P-201ENST00000363680 108 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 MIR95-201ENST00000385072 81 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 SNORA12.2-201ENST00000391040 156 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 MIR208B-201ENST00000401172 77 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 HMGB3P2-201ENST00000411913 584 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 AC027124.2-201ENST00000428249 105 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.41□□□□□ -2.02
DDX4Q9NQI0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.41□□□□□ -2.02
DDX4Q9NQI0 Y_RNA.639-201ENST00000458981 102 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 AC027575.1-201ENST00000481064 460 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 AC145146.1-201ENST00000496370 254 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 Y_RNA.706-201ENST00000516933 99 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 AC004584.2-201ENST00000570407 410 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 AC009127.3-201ENST00000570531 403 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.41□□□□□ -2.02
DDX4Q9NQI0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 ZNF355P-201ENST00000427301 3216 ntBASIC2.41□□□□□ -2.02
DDX4Q9NQI0 RNU6-1115P-201ENST00000362490 106 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 U3.9-201ENST00000363823 204 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.197-201ENST00000364004 102 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 SNORD42.2-201ENST00000365570 69 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 Y_RNA.419-201ENST00000384041 102 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 RNU6-17P-201ENST00000384245 107 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 RNU6-18P-201ENST00000384527 107 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 RNU6-482P-201ENST00000391068 107 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 AL161788.1-201ENST00000441805 169 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 AC007677.1-201ENST00000445757 515 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.4□□□□□ -2.03
DDX4Q9NQI0 SNORA48.11-201ENST00000517015 89 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX4Q9NQI0 AL080274.1-201ENST00000605565 220 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 AC012640.5-201ENST00000623897 319 ntBASIC2.4□□□□□ -2.03
DDX4Q9NQI0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
DDX4Q9NQI0 RNA5SP125-201ENST00000364843 120 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 MIR32-201ENST00000384965 70 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 MIR625-201ENST00000385047 85 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 MIR559-201ENST00000385188 96 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 SNORA46.1-201ENST00000391069 153 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX4Q9NQI0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX4Q9NQI0 CBX3P6-201ENST00000430257 527 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
DDX4Q9NQI0 RPL23AP42-201ENST00000471152 471 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 RNA5SP54-201ENST00000516951 92 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 RNU7-4P-201ENST00000516961 62 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 AC018630.3-201ENST00000542637 96 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 AC110588.1-201ENST00000559699 137 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX4Q9NQI0 MIR5089-201ENST00000580047 84 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 AC010928.2-201ENST00000588017 287 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 PCGEM1.1-201ENST00000613431 131 ntBASIC2.39□□□□□ -2.03
DDX4Q9NQI0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
DDX4Q9NQI0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
DDX4Q9NQI0 RNU5F-3P-201ENST00000363767 117 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms