Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
VTA1Q9NP79 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.09□□□□□ -1.91
VTA1Q9NP79 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
VTA1Q9NP79 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VTA1Q9NP79 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
VTA1Q9NP79 MIR26A1-201ENST00000362205 77 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 RNU1-72P-201ENST00000362976 153 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 Y_RNA.183-201ENST00000363882 113 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 RNU6-793P-201ENST00000384233 104 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 MIR218-1-201ENST00000384999 110 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 MIR329-1-201ENST00000385028 80 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 AL356057.3-201ENST00000402607 340 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 MIR1294-201ENST00000408503 142 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 Y_RNA.595-201ENST00000410403 105 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.09□□□□□ -1.91
VTA1Q9NP79 AC067942.3-201ENST00000512025 362 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 MTCO2P24-201ENST00000515611 426 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 AC131281.1-201ENST00000522984 164 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.09□□□□□ -1.91
VTA1Q9NP79 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.09□□□□□ -1.91
VTA1Q9NP79 ZNF861P-201ENST00000588126 639 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 AL356280.1-201ENST00000603614 379 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 AC090517.3-201ENST00000625170 141 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 U6.92-201ENST00000636464 89 ntBASIC3.09□□□□□ -1.91
VTA1Q9NP79 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
VTA1Q9NP79 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
VTA1Q9NP79 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
VTA1Q9NP79 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.92
VTA1Q9NP79 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
VTA1Q9NP79 RNU6-450P-201ENST00000364654 107 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 Y_RNA.439-201ENST00000384119 94 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 RNU6-318P-201ENST00000384283 103 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 MIR627-201ENST00000384979 97 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 RN7SKP284-201ENST00000411002 343 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 AL161788.1-201ENST00000441805 169 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 AC009237.7-201ENST00000447357 229 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.08□□□□□ -1.92
VTA1Q9NP79 HMGN1P10-201ENST00000474557 553 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 AC103975.1-201ENST00000482506 483 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 MRPS35P2-201ENST00000508242 191 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 AC096725.1-201ENST00000514266 313 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 RNU6-1046P-201ENST00000516538 107 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 UBL5P4-201ENST00000562584 236 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 AC090517.1-201ENST00000569307 266 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 AC125232.2-201ENST00000592457 143 ntBASIC3.08□□□□□ -1.92
VTA1Q9NP79 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VTA1Q9NP79 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
VTA1Q9NP79 RNU6-1309P-201ENST00000363305 108 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 RNA5SP68-201ENST00000363885 119 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 RNU6-461P-201ENST00000364195 107 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 RNU6-26P-201ENST00000383985 107 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 Y_RNA.458-201ENST00000384240 102 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 Y_RNA.556-201ENST00000384677 113 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 RNU6-1109P-201ENST00000391187 107 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 FO393413.1-201ENST00000402892 195 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VTA1Q9NP79 SNORD12B-201ENST00000410433 91 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.07□□□□□ -1.92
VTA1Q9NP79 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.07□□□□□ -1.92
VTA1Q9NP79 RPEP5-201ENST00000441137 268 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 AL513328.1-201ENST00000446460 224 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 PCNPP5-201ENST00000452246 481 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.07□□□□□ -1.92
VTA1Q9NP79 CKS1BP2-201ENST00000497342 240 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.07□□□□□ -1.92
VTA1Q9NP79 SNORA40.15-201ENST00000516884 107 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 HSPE1P18-201ENST00000517602 280 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.07□□□□□ -1.92
VTA1Q9NP79 MIR6817-201ENST00000615588 66 ntBASIC3.07□□□□□ -1.92
VTA1Q9NP79 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
VTA1Q9NP79 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VTA1Q9NP79 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
VTA1Q9NP79 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
VTA1Q9NP79 Y_RNA.597-201ENST00000410463 100 ntBASIC3.06□□□□□ -1.92
VTA1Q9NP79 MTCYBP9-201ENST00000431021 303 ntBASIC3.06□□□□□ -1.92
VTA1Q9NP79 AL731563.1-201ENST00000442202 214 ntBASIC3.06□□□□□ -1.92
VTA1Q9NP79 AC003982.1-202ENST00000469928 248 ntBASIC3.06□□□□□ -1.92
VTA1Q9NP79 AC010655.3-201ENST00000478818 450 ntBASIC3.06□□□□□ -1.92
VTA1Q9NP79 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.06□□□□□ -1.92
VTA1Q9NP79 SNORA48.11-201ENST00000517015 89 ntBASIC3.06□□□□□ -1.92
VTA1Q9NP79 AC008269.2-201ENST00000561915 1105 ntBASIC3.06□□□□□ -1.92
VTA1Q9NP79 AC240442.1-201ENST00000616055 283 ntBASIC3.06□□□□□ -1.92
VTA1Q9NP79 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.06□□□□□ -1.92
VTA1Q9NP79 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VTA1Q9NP79 MTND5P35-201ENST00000557537 1720 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 Y_RNA.210-201ENST00000364161 110 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 Y_RNA.462-201ENST00000384268 102 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 RNU6-463P-201ENST00000384340 107 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 Y_RNA.574-201ENST00000384766 95 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 MIR487A-201ENST00000385009 80 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.05□□□□□ -1.92
VTA1Q9NP79 AC027124.2-201ENST00000428249 105 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 AC004386.2-201ENST00000441858 148 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 RPS23P5-201ENST00000495419 428 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 AC010469.2-201ENST00000496412 480 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 RNU2-44P-201ENST00000516795 194 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.05□□□□□ -1.92
VTA1Q9NP79 AC233702.2-202ENST00000562547 291 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 MIR4659A-201ENST00000580269 81 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms