Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.32□□□□□ -1.88
CD248Q9HCU0 RPL23AP3-201ENST00000453844 468 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 RNU7-23P-201ENST00000459465 62 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.32□□□□□ -1.88
CD248Q9HCU0 AC140059.1-201ENST00000489238 361 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 RNA5SP217-201ENST00000515959 91 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 AP004607.1-201ENST00000524456 203 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.32□□□□□ -1.88
CD248Q9HCU0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.32□□□□□ -1.88
CD248Q9HCU0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.32□□□□□ -1.88
CD248Q9HCU0 AL391261.3-201ENST00000557194 520 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 AL033523.1-201ENST00000605153 153 ntBASIC3.32□□□□□ -1.88
CD248Q9HCU0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD248Q9HCU0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CD248Q9HCU0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD248Q9HCU0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.31□□□□□ -1.88
CD248Q9HCU0 RNU6-449P-201ENST00000383914 107 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 RNU6-142P-201ENST00000384019 107 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 MIR329-1-201ENST00000385028 80 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 RNA5SP229-201ENST00000410809 99 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 AL139281.1-201ENST00000422120 335 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 AC243964.1-201ENST00000441814 261 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.31□□□□□ -1.88
CD248Q9HCU0 snoU13.28-201ENST00000459235 104 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.31□□□□□ -1.88
CD248Q9HCU0 AC091874.1-201ENST00000511402 339 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 RNA5SP341-201ENST00000516261 117 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.31□□□□□ -1.88
CD248Q9HCU0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.31□□□□□ -1.88
CD248Q9HCU0 UBL5P4-201ENST00000562584 236 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 AC005176.2-201ENST00000596933 147 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 AC073308.1-201ENST00000623696 305 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.31□□□□□ -1.88
CD248Q9HCU0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CD248Q9HCU0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD248Q9HCU0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD248Q9HCU0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD248Q9HCU0 RNU6-137P-201ENST00000363680 108 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 Y_RNA.217-201ENST00000364214 105 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 RNU4-56P-201ENST00000364700 142 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 RNU6-1145P-201ENST00000384246 107 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 Y_RNA.488-201ENST00000384403 102 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 SNORA22C-201ENST00000384614 134 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 RNU6-159P-201ENST00000391080 106 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 RNU6-131P-201ENST00000391144 107 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 FO393413.1-201ENST00000402892 195 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 AL357139.1-201ENST00000407792 426 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.3□□□□□ -1.88
CD248Q9HCU0 AL365496.1-201ENST00000426885 215 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 AL162725.1-201ENST00000435405 301 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 SNRPEP9-201ENST00000436794 238 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 UBBP3-201ENST00000445497 241 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 AC009237.7-201ENST00000447357 229 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 UQCRHP3-201ENST00000451503 251 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 Y_RNA.641-201ENST00000459414 105 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.3□□□□□ -1.88
CD248Q9HCU0 TRAV28-201ENST00000557548 323 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
CD248Q9HCU0 MIR5692C2-201ENST00000577959 77 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 AL138963.2-201ENST00000605137 226 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.3□□□□□ -1.88
CD248Q9HCU0 MIR6733-201ENST00000635723 61 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
CD248Q9HCU0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD248Q9HCU0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD248Q9HCU0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
CD248Q9HCU0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD248Q9HCU0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD248Q9HCU0 ZNF204P-201ENST00000416749 2397 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD248Q9HCU0 RNU5B-2P-201ENST00000363036 113 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 U8.9-201ENST00000365667 134 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 Y_RNA.400-201ENST00000383963 111 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 U8.10-201ENST00000384260 133 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 Y_RNA.510-201ENST00000384511 114 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 Y_RNA.568-201ENST00000384742 113 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 RNU6-1168P-201ENST00000390831 104 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.29□□□□□ -1.88
CD248Q9HCU0 RNA5SP76-201ENST00000516277 87 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 RNU6-1198P-201ENST00000516904 67 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.29□□□□□ -1.88
CD248Q9HCU0 AC016256.1-201ENST00000547971 354 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.29□□□□□ -1.88
CD248Q9HCU0 CYCSP39-201ENST00000565821 309 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 AC136601.2-201ENST00000604356 474 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 AC024581.2-201ENST00000619986 252 ntBASIC3.29□□□□□ -1.88
CD248Q9HCU0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CD248Q9HCU0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CD248Q9HCU0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CD248Q9HCU0 SNORA80A-201ENST00000363922 136 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CD248Q9HCU0 SNORA7.4-201ENST00000384249 137 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 SNORA44-201ENST00000384584 132 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 Y_RNA.571-201ENST00000384753 98 ntBASIC3.28□□□□□ -1.88
CD248Q9HCU0 SNORA40.19-201ENST00000390846 128 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 227.8 ms