Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SNORA12-201ENST00000391162 147 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 MTCYBP2-201ENST00000407745 171 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 SNORA11.2-201ENST00000408318 127 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 HMGB3P2-201ENST00000411913 584 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 MCFD2P1-201ENST00000417812 300 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AL590556.1-201ENST00000423231 483 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 MTND4P19-201ENST00000446659 478 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AC104435.1-201ENST00000483483 166 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 CKS1BP2-201ENST00000497342 240 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AC144568.1-201ENST00000520139 137 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AL442663.2-201ENST00000554385 511 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 MIR5694-201ENST00000581190 76 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.812-201ENST00000610788 101 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 RMST_6.1-201ENST00000611980 203 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.784-201ENST00000613803 101 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.787-201ENST00000616522 101 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AL132822.1-201ENST00000617063 513 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.780-201ENST00000617336 101 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AC087588.2-201ENST00000617667 426 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.801-201ENST00000619005 101 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.148-201ENST00000363557 117 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 RNU6-17P-201ENST00000384245 107 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 RNU6-18P-201ENST00000384527 107 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 U6atac.2-201ENST00000408644 118 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 AC114482.1-201ENST00000418010 247 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 CHEK2P4-201ENST00000450340 246 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 SNORA25.10-201ENST00000515926 124 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 HSBP1P1-201ENST00000555205 166 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDH9Q9HC56 AC009127.3-201ENST00000570531 403 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.32□□□□□ -2.04
PCDH9Q9HC56 AL449363.1-201ENST00000617815 186 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 AC137590.2-201ENST00000619709 240 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
PCDH9Q9HC56 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDH9Q9HC56 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDH9Q9HC56 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.39-201ENST00000362620 98 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 SNORD115-32-201ENST00000364079 82 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 RNU4-42P-201ENST00000364738 142 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.319-201ENST00000365138 92 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 RNU6-220P-201ENST00000390919 107 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.597-201ENST00000410463 100 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 EEF1B2P7-201ENST00000451177 676 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
PCDH9Q9HC56 U8.22-201ENST00000459141 133 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 AP000870.1-201ENST00000472927 406 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.31□□□□□ -2.04
PCDH9Q9HC56 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 UBL5P4-201ENST00000562584 236 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 AC006600.1-201ENST00000572529 153 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 AL713866.2-201ENST00000603579 219 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 PCGEM1.1-201ENST00000613431 131 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 AC091925.1-201ENST00000623204 462 ntBASIC2.31□□□□□ -2.04
PCDH9Q9HC56 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDH9Q9HC56 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDH9Q9HC56 AC091812.1-201ENST00000432235 1948 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
PCDH9Q9HC56 ZNF204P-201ENST00000416749 2397 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 U8.10-201ENST00000384260 133 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.557-201ENST00000384680 107 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 SNORA46.1-201ENST00000391069 153 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 RNU4-53P-201ENST00000410828 140 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 USP9YP16-201ENST00000430287 407 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 AL118496.2-201ENST00000448300 230 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.3□□□□□ -2.04
PCDH9Q9HC56 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.3□□□□□ -2.04
PCDH9Q9HC56 USP9YP23-201ENST00000455085 407 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.3□□□□□ -2.04
PCDH9Q9HC56 ANXA2P1-201ENST00000505539 926 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 RNU4-77P-201ENST00000516692 156 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 RNU6-586P-201ENST00000517265 104 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 AC022868.1-201ENST00000517767 391 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 MIR5695-201ENST00000579717 85 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 AL138963.2-201ENST00000605137 226 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 AC009831.4-201ENST00000620744 325 ntBASIC2.3□□□□□ -2.04
PCDH9Q9HC56 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDH9Q9HC56 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDH9Q9HC56 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PCDH9Q9HC56 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PCDH9Q9HC56 U3.9-201ENST00000363823 204 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 RNU1-115P-201ENST00000365329 160 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 SNORA33.2-201ENST00000365413 134 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 RNU6-1274P-201ENST00000384557 107 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms