Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC004492.1-201ENST00000607036 742 ntBASIC1.65□□□□□ -2.15
RPAP3Q9H6T3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.65□□□□□ -2.15
RPAP3Q9H6T3 FAM157A-202ENST00000615155 405 ntBASIC1.65□□□□□ -2.15
RPAP3Q9H6T3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.65□□□□□ -2.15
RPAP3Q9H6T3 AL353770.2-201ENST00000620024 78 ntBASIC1.65□□□□□ -2.15
RPAP3Q9H6T3 OR4G1P-203ENST00000641984 1631 ntBASIC1.65□□□□□ -2.15
RPAP3Q9H6T3 AC121333.1-201ENST00000567488 2709 ntBASIC1.65□□□□□ -2.15
RPAP3Q9H6T3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 MIR424-201ENST00000362227 98 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 Y_RNA.38-201ENST00000362617 102 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 SNORD31B-201ENST00000364977 69 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 RNU6-214P-201ENST00000384130 107 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 RNU6-439P-201ENST00000384188 106 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 MIR521-1-201ENST00000384902 87 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 RNA5SP100-201ENST00000410903 110 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 RNA5SP59-201ENST00000410922 110 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 ERLEC1P1-201ENST00000433806 578 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 SEPT14P3-201ENST00000439401 183 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 MTND1P1-201ENST00000445453 368 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 AL732372.2-207ENST00000445840 183 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 SEPT14P2-201ENST00000453405 183 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 SEPT14P4-201ENST00000513445 186 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 RNU6-314P-201ENST00000516574 104 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 FO082796.1-201ENST00000523795 183 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 AC016256.1-201ENST00000547971 354 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 HMGB1P33-201ENST00000563485 527 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 MIR5094-201ENST00000578766 85 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 AL162413.1-201ENST00000603198 110 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.64□□□□□ -2.15
RPAP3Q9H6T3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC233981.2-201ENST00000611524 1614 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 U8.1-201ENST00000362843 134 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 RNU1-76P-201ENST00000362903 159 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 RNU4-24P-201ENST00000364565 139 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 Y_RNA.436-201ENST00000384097 102 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 SNRPGP13-201ENST00000442212 177 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC010409.1-201ENST00000487382 476 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 RPS23P5-201ENST00000495419 428 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC114801.2-201ENST00000503825 781 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC097473.1-201ENST00000508142 408 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC100830.2-201ENST00000581636 240 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC005786.1-201ENST00000588553 154 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 AC010900.2-201ENST00000604508 210 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 RPL17P51-201ENST00000605218 238 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 MIR3976-201ENST00000606807 139 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.63□□□□□ -2.15
RPAP3Q9H6T3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 RNU6-418P-201ENST00000384035 107 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 MIR487A-201ENST00000385009 80 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 RNU6-908P-201ENST00000410160 94 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 RNA5SP494-201ENST00000410653 129 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 HSPE1P24-201ENST00000450782 238 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 AC016925.1-201ENST00000458303 298 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 AC016727.2-201ENST00000603988 621 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 PRR13P7-201ENST00000605538 430 ntBASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.62□□□□□ -2.15
RPAP3Q9H6T3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 AL590002.1-201ENST00000406554 418 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 MIR1276-201ENST00000408707 83 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 MTCO1P20-201ENST00000425366 358 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 MTCO3P46-201ENST00000425787 232 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 C8orf59P1-201ENST00000429930 303 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 RNU7-187P-201ENST00000458985 68 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 HMGN1P7-201ENST00000491722 313 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 SUB1P4-201ENST00000566062 339 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 CPDP1-201ENST00000579660 283 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 MIR4422-201ENST00000581938 83 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 AC146944.4-201ENST00000602697 718 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 AC080013.6-201ENST00000606185 215 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 AC104458.1-201ENST00000608243 463 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 DISC2.1-201ENST00000612827 205 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 AC083806.3-201ENST00000614016 455 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.61□□□□□ -2.15
RPAP3Q9H6T3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms